LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi12g1240	ATGATATCAGTGGTTCCTTGGGGATTGGGGAGAGTGAGGAGGTCATGCTCGTGGAGCATTCTTGATCATCAAGAGAGAATAAACAGATTTTTTTACGAATCTTCACCCGCTTGTTCTTTTGACTTAGACCTCGTGAAACCCTCAATTCCACTTGTCTCCTTCCTCGAACGTGTTCAGGAAACTGCTTTGGCTACTTTGGGAAAATCTGAATTCGATCCTAAAACATATGTGGACTTGTCTTTGAAGTTCAGTTTGTCTGAGGCAGAGGAGGCATTTGATAAGCTTGCTAGGTCTTCTAATGGCTCTGTACCAGCTGATGTTTTCGATGGTTTTATAGAAAGATACTTTGATGGTGCAGGGGATGATGTGGTGTACCATGAACCAGAGGATTATGTGGAAGAGCCTGAGGGATTTTTGCCCAAAGTTGAGCATCCTGAGGTGAGGGCATGGGCTTTGAAGGTCCATTCCCTATGGAAAAACTTGAGTCGCAGAGTATCAGATGGGGTCAAAAGTCATCCCCATTTGCATACTCTTCTTCCTCTTCCTGCTCCTTTCATCATTCCTGGTTCTAGATATCATGAGGTTTATTACTGGGATTCCTATTGGATAATCAGGGGCTTACTGGTGAGTAAAATGTACAAGACAGCCAAAGGGATGGTGATTAATCTTATTTCTTTGTTAGAAGAATATGGATTTGTGCCTAATGGTGCAAGGGCCTACTACACCAATAGGAGCCAGCTTCCCCTTTTAAGTGCTATGATCTATGAGATCTACAATGCCACTGGTGATATAGAACTGGTCAAAACATCTCTTCCTGCATTAAGGAAAGAGTATGAGTTTTGGAATTCAGAGATGCATAGGGTGACCATTGAGGATCCTCAAGGTTACACCCACACCTTGAATCGTTATAATGCAATGTGGAATAAACCCAGGCCAGAGGGTTCAGTAAATGACAAGGGTTTTGCTTCCAAGTTTTTGGATGTTTCAGAAAAACAGCAATTTTACCATGAAGTGGCAACAACTTGTGAATCAGGATGGGATTTCAGCACGAGATGGTTGAAAGATCCGTTGGAATTTACATCCGTGGCTACAGCTTCTGTAATACCTGTTGATCTAAATTCAGTTATTCTTGGGATGGAACTAAATATTGCATTTTTCGCAAAAGTTATTGGAGATAATAGTACTGCCCAGCACTTCCTGCAACTTTCTGAAAGTAGAAAGAAGGCGCTCGACTCTGTTTTCTGGAACTCCGACATGAAACAATGGCTTGATTATTGGCTTACAAATGGTACATGTCAGGGAGTTCAAATCTGGGAAGATCGGCAGCAGAATCACAAAATATTCGGTTCCAACTTTGTTCCTTTATGGATGGAACCATTTTACTCAGACCCTTTAATTGTGGGTAGCACCGTTGAAAGTCTCAAAACTTGTGGGCTGGTTCGTGCTGCTGGAATAGCAACCTCCTTGAGGAATTCAGGACAACAGTGGGATTTCCCAAATGGCTGGCCCCAAATTCAACATATGATAGTTGAAGGTCTGATGAAATCTGGACTGAAAGAAGCAGCTTCACTTGGGGAAGAAATTGCAAGGAGATGGATCACAACCAACTATATTGCCTACAAGAGAACAGGGTTTATGCATGAAAAATATGATGTTGAGCATTGTGGAGAGTTTGGAGGTGGTGGTGAATATGTACCTCAGACTGGTTTTGGATGGTCAAATGGAGTGGTACTTGCTTTGTTGGAGGAGTTTGGATGGCCTCGAGATCTCAATATTAACTGCCAAGAGATTAAAAGCAATGCCAATGGTAATTAA	1815	0.422	MISVVPWGLGRVRRSCSWSILDHQERINRFFYESSPACSFDLDLVKPSIPLVSFLERVQETALATLGKSEFDPKTYVDLSLKFSLSEAEEAFDKLARSSNGSVPADVFDGFIERYFDGAGDDVVYHEPEDYVEEPEGFLPKVEHPEVRAWALKVHSLWKNLSRRVSDGVKSHPHLHTLLPLPAPFIIPGSRYHEVYYWDSYWIIRGLLVSKMYKTAKGMVINLISLLEEYGFVPNGARAYYTNRSQLPLLSAMIYEIYNATGDIELVKTSLPALRKEYEFWNSEMHRVTIEDPQGYTHTLNRYNAMWNKPRPEGSVNDKGFASKFLDVSEKQQFYHEVATTCESGWDFSTRWLKDPLEFTSVATASVIPVDLNSVILGMELNIAFFAKVIGDNSTAQHFLQLSESRKKALDSVFWNSDMKQWLDYWLTNGTCQGVQIWEDRQQNHKIFGSNFVPLWMEPFYSDPLIVGSTVESLKTCGLVRAAGIATSLRNSGQQWDFPNGWPQIQHMIVEGLMKSGLKEAASLGEEIARRWITTNYIAYKRTGFMHEKYDVEHCGEFGGGGEYVPQTGFGWSNGVVLALLEEFGWPRDLNINCQEIKSNANGN	604

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi12g1240	604	Gene3D	-	53	597	IPR012341	GO:0005975
	Mibi12g1240	604	SUPERFAMILY	Six-hairpin glycosidases	66	587	IPR008928	GO:0005975
	Mibi12g1240	604	Pfam	Trehalase	71	585	IPR001661	GO:0004555\|GO:0005991
	Mibi12g1240	604	PANTHER	TREHALASE	37	598	IPR001661	GO:0004555\|GO:0005991
	Mibi12g1240	604	PRINTS	Glycosyl hydrolase family 37 signature	335	352	IPR001661	GO:0004555\|GO:0005991
	Mibi12g1240	604	PRINTS	Glycosyl hydrolase family 37 signature	367	384	IPR001661	GO:0004555\|GO:0005991
	Mibi12g1240	604	PRINTS	Glycosyl hydrolase family 37 signature	568	581	IPR001661	GO:0004555\|GO:0005991
	Mibi12g1240	604	PRINTS	Glycosyl hydrolase family 37 signature	300	317	IPR001661	GO:0004555\|GO:0005991
	Mibi12g1240	604	PRINTS	Glycosyl hydrolase family 37 signature	230	248	IPR001661	GO:0004555\|GO:0005991
	Mibi12g1240	604	PRINTS	Glycosyl hydrolase family 37 signature	410	426	IPR001661	GO:0004555\|GO:0005991
	Mibi12g1240	604	PRINTS	Glycosyl hydrolase family 37 signature	488	504	IPR001661	GO:0004555\|GO:0005991

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi12g1240	Mibi-ChrMibi12	28003511	28010145	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi12g1240	45	594	Trehalose Biosynthesis Gene Families	AT4G24040	56.679	0.0	635

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mibi12g1240	12	28003511	28010145	Mibi12g1240	12	28003511	28010145	ECH