Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1238 ATGGCGGAATCTCTATTCCTTTTACTTTTTCAACTTCATCTTCTATACTCACTAGCAATCTCAATGGCTTTCACAGAAACAGGGTTTATGAAGCCATCAATCCCTCTTGTCTCCTTCCTCGAACGCCTTCAAGAAACAGCAGTCAACACTTTTGGCAGATCCAACGTTGACCCAAAGACCTACGTTGACTTGTCGTTAAGGTTCAGCTTATCGGAGACAGAGGAGGCATTTGATAAGCTTCCTAGGTCTTCTAATGGCTCTGTTCAAGCCGATGATTTGAACGGTTTTATAGCAAGATACTTTGATGGTGCAGACGAGGATATGGTGTACCACGAACCAGAGGATTACTTGGAAGAGCCAGAGGGATTCTTGCCTAAAGTTGAGCATCCAGAAGTGAGGGCATGGGCTTTGAAGGTCCATTCACTTTGGAAAAACTTGAGTCGAAGTGTATCAAGTGGGGTTAAGAGTAATCCCCATTTGCATACTCTTCTTCCTCTTCCTGCTCCTTTCATCATTCCTGGTTCCAGATTTCGTGAGGTTTATTACTGGGATTCCTACTGGATAATCAGGGGCTTATTGGTGAGTAAAATGTACAAGACAGCCAAAGGGATGGTGATTAATCTTATTTCTTTGTTAGAAGAATATGGATTTGTGCCTAATGGTGCAAGGGCTTACTACACCAATAGGAGCCAGCCTCCCCTTTTAAGTGCTATGATCTATGAGATCTACAATGCCACCGGTGATATAGAATTGGTCAAAAAATCCCTTCCTGCATTAAGGAAAGAGTATGAGTTTTGGAATTCAGAGATGCATAGGGTGACCATTGAGGATCCTCAAGGTTGCACTCACACATTAAATCGGAACAATGCAATGTGGAATAAACCCCGGCCCGAGGGTTCAGTAAAAGACAAGGGATTTGCTTCCAAGTTTTTGGATGTTTCAGAAAAACAGCAGTTTTACCATGAAGTGACAACAATTTGTGAAGCAGGATGGGATTTCAGCACAAGATGGTTGAAAGATCGGTTAGAATTTACATCCATGGCTACAACTTCTGTAATACCTGTTGATCTAAATGCATTTATTCTTGGGATGGAACTAAATATTGCATTTTTCGCAAAAGTTACTGGAGATAATAGCACTGCTCAGCACTTCCTGCAACTTTCTGAAAGTAGAAAGAAGGCGCTCAACTCTGTTTTCTGGAATTCAGACATGAAACAATGGCTTGATTATTGGCTCACAAATAGTACATGTCAGGGAGTTCAAGTCTGGGAAGATCAGCAGCAGAATCACAATGTATTTGCTTCCAACTTTGTTCCTCTATGGATGGAACCATTTTACTCAGACTCTTCGATTGTGGGTAGCGTCGTTGAAAGTCTCAAAACTTGTGGGCTGGTTCGTGCTGCTGGAATTGCTGCCTCCTTGACGAATTCAGGACAACAGTGGGACTTCCCAAATGGCTGGCCCCAAATTCAACATATGATAGTTGAAGGTCTGATGAAATCTGGACTGAAAGAAGCAGCTTCACTTGGGGAAGAAATTGCAAGGAGATGGATCACAACCAACTATATCGCCTACAAGAAAACAGGGTTCATGCATGAAAAATATGATGTGGAGCATTGTGGAGAGTTTGGAGGTGGTGGATTATATGTGCCTCAGACTGGTTTTGGCTGGTCAAATGGAGTGGTGCTTCTTTTCTTGGAGGAGTTTGGATGGCCTCGAGATCGTGATATTGACTGTTCATCAATTTCCTCAGAACTTGACACAATTGGCAATTGA 1776 0.4245 MAESLFLLLFQLHLLYSLAISMAFTETGFMKPSIPLVSFLERLQETAVNTFGRSNVDPKTYVDLSLRFSLSETEEAFDKLPRSSNGSVQADDLNGFIARYFDGADEDMVYHEPEDYLEEPEGFLPKVEHPEVRAWALKVHSLWKNLSRSVSSGVKSNPHLHTLLPLPAPFIIPGSRFREVYYWDSYWIIRGLLVSKMYKTAKGMVINLISLLEEYGFVPNGARAYYTNRSQPPLLSAMIYEIYNATGDIELVKKSLPALRKEYEFWNSEMHRVTIEDPQGCTHTLNRNNAMWNKPRPEGSVKDKGFASKFLDVSEKQQFYHEVTTICEAGWDFSTRWLKDRLEFTSMATTSVIPVDLNAFILGMELNIAFFAKVTGDNSTAQHFLQLSESRKKALNSVFWNSDMKQWLDYWLTNSTCQGVQVWEDQQQNHNVFASNFVPLWMEPFYSDSSIVGSVVESLKTCGLVRAAGIAASLTNSGQQWDFPNGWPQIQHMIVEGLMKSGLKEAASLGEEIARRWITTNYIAYKKTGFMHEKYDVEHCGEFGGGGLYVPQTGFGWSNGVVLLFLEEFGWPRDRDIDCSSISSELDTIGN 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1238 591 Pfam Trehalase 56 570 IPR001661 GO:0004555|GO:0005991
Mibi12g1238 591 Gene3D - 43 581 IPR012341 GO:0005975
Mibi12g1238 591 SUPERFAMILY Six-hairpin glycosidases 51 573 IPR008928 GO:0005975
Mibi12g1238 591 PANTHER TREHALASE 36 582 IPR001661 GO:0004555|GO:0005991
Mibi12g1238 591 PRINTS Glycosyl hydrolase family 37 signature 320 337 IPR001661 GO:0004555|GO:0005991
Mibi12g1238 591 PRINTS Glycosyl hydrolase family 37 signature 473 489 IPR001661 GO:0004555|GO:0005991
Mibi12g1238 591 PRINTS Glycosyl hydrolase family 37 signature 352 369 IPR001661 GO:0004555|GO:0005991
Mibi12g1238 591 PRINTS Glycosyl hydrolase family 37 signature 553 566 IPR001661 GO:0004555|GO:0005991
Mibi12g1238 591 PRINTS Glycosyl hydrolase family 37 signature 395 411 IPR001661 GO:0004555|GO:0005991
Mibi12g1238 591 PRINTS Glycosyl hydrolase family 37 signature 215 233 IPR001661 GO:0004555|GO:0005991
Mibi12g1238 591 PRINTS Glycosyl hydrolase family 37 signature 285 302 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1238 Mibi-ChrMibi12 27989329 27993206 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1238 25 579 Trehalose Biosynthesis Gene Families AT4G24040 56.172 0.0 640