Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1236 ATGGTTGAGACTCAGATGGGTTCTTCGTCGCTTTGGAATAGTCTCAAATGTCTTTGTTCTGCTTATGGTTGGTCTTATGCCATTTTCTGGCGCTCACATCCTCCTAATTCTCTGTTTCTGTCTGTGGAAAATGCTTACTACGAAGGGCAATTAGGACAAGAAATCACCAAGACTATTCCACAACTTCATTTCCTGGGTGAAGGAATTGTTGGTCAAGTTGCTTCTACCGGCAAGCACAGATGGATTTTCTCAGATGTTCAAACCCAAGAATGGAATATAACAACAGGTGTCTCTGGAGGTCTAGATCGTTGTGAGCTTGATTCTGACTTGCGTCAACAATTCTCCTTTGGGATTAAGACAATTGCCGTGATATATGTTCAATCATTGGGAGTAGTACAATTAGGATCCACACAGAAGATCTTGGAAAGAGAGGAAATGTTGGAACAAACACAAAGATTGTTCATGGAGACTGAAAATTTGGATACAGTTGATGCACAAGCAAATATGGTTTTACCTTGGGATTTTGAAAACTTTGATCTGAATGGATTGTTGGCCTCTTCTGAAAACTTGTGTTCTTGGAATCTCAACCCTGAAGATGACAATAACATCATCAATGAGGGGATTAGAAATGCTTGTTTTTCAACAAGCATGGATAATTCTCTCCTTTCCACTTGTAAGAATCAGGAAGATGGAATGATCAGCTTGCATGCGGAATCTTCTTGTCTTAGCGATCAATTAACAACAGCCACAGAAGCTCAAATAGTATTACCAGAGAAGGATTGTTTTGAAGTTCTTTTGAATCATAACTCTTGTGTTGAAAACCCATGTTTTGGCGCACGGAGTAGTGAAACTTCTTTGGCTTCATCAATGGCTGCTCAAGATTTTACTACTGAGGATTCTGTATTGACCTCTTTGTACAGCATGAACAGAAGCATGCTTGGATCATCAGGAGGATCATTTCAAGAAAAATTAGGAAATTCTCTGGAATCAATGTACAACCCTTTTGCTCAATCTCTACATGGACTGTCTAAGATTTCGGCTGAGGAATTGTCCGAGTTATGCTCTGTGGATGATCTTTGTCAGAGGTTTGCTTCTTCTCCAGAACATAGCACCTGTGCAACAAATACTCCATTGGAAAATTCTCTCTTTCAATCCTTAGAAATCAATCCCACTTGTGCTGCCTTAAGTGGTGATCCGCTTAAAAGTCTCTCAGATGGACACCAAACACCTACCCTAATGCATGCTTTTGAAAGCAATACCTCACTTGATTTTGTTGGTGAGTTCTGGGGGAATATGATTGCACCAATGGTGAAATCTGCTCCCAATAATTTTGCTTCATCTGAATGCAAATCAGAGTTGAAGAATACAGTTACACCCAATTCCACCAAGAAGGGATTATTTGCAGAGCTTGGTATTGAAGAGCTTTTGAATGGTGGATCCAGTTTTGAGGATCAAATTTCTACGACTAAAAGGCGTAGGACAGATTCATCTGCGAGTAGTAATCCTGTTCCTAACTTGGACAAGACAAACCATCTTGTACACAAGAAGAAAGAGATGTTTTCTACATCAGTGGTAGGATCTTGGATGGACCATAGTCAAAGCTTTAATGATGTTAAGGTTGTTCCTCAAAAGCCAGAGGAATCTACAAAGATCTCAAGGAAGAGGGCTAAGCCAGGAGAGAGTACCCGACCCCGACCAAAAGATCGCCAGCAAATCCAAGACCGTATCAAAGAATTAAGAGGGATCATCCCCAGTGGTGGAAAGTGTAGCATTGACTCTTTGTTGGAACGCACCATCAAATACATGACTTTCTTACAAGGCGTCACAAAATATGCAGATAAGCTGCAAGAACCCAAAAGCCCAAAGCTCATAGAGGAAGCGAATAATATGGTGGAGAAGAACAAAAGTGTGGGAGAATCTGATATCAAAGGTGGTAGTGGTGGAGTTACATGGGCATTTGAAGTTGCAGGTCAAAAAATGGCATGCCCAATCATAGTGGAGGATATGAACCAATCAGGCCAAATGCTCATAGAGATGCTTTGTGAGGAGCAGGGCTTGTTCCTCGAGATAGCAGAAATAATCCGCGGATTTGGATTGAATATTCTGAAAGGGAAGATGGAAATAAGGGACAACAAATTATGGGGACGCTTCATTGTTGAGGCAAGCAGACATGTAACAAGGATTGATGTATTTTGGTATCTGGTTCAGCTTCTACCTCAGACAAGTAGTGCATCTGAAATGGATAATTATGAGAAAATAGATACAGCACTACCTGCTGCTGTGGCCATGACGTGA 2295 0.41 MVETQMGSSSLWNSLKCLCSAYGWSYAIFWRSHPPNSLFLSVENAYYEGQLGQEITKTIPQLHFLGEGIVGQVASTGKHRWIFSDVQTQEWNITTGVSGGLDRCELDSDLRQQFSFGIKTIAVIYVQSLGVVQLGSTQKILEREEMLEQTQRLFMETENLDTVDAQANMVLPWDFENFDLNGLLASSENLCSWNLNPEDDNNIINEGIRNACFSTSMDNSLLSTCKNQEDGMISLHAESSCLSDQLTTATEAQIVLPEKDCFEVLLNHNSCVENPCFGARSSETSLASSMAAQDFTTEDSVLTSLYSMNRSMLGSSGGSFQEKLGNSLESMYNPFAQSLHGLSKISAEELSELCSVDDLCQRFASSPEHSTCATNTPLENSLFQSLEINPTCAALSGDPLKSLSDGHQTPTLMHAFESNTSLDFVGEFWGNMIAPMVKSAPNNFASSECKSELKNTVTPNSTKKGLFAELGIEELLNGGSSFEDQISTTKRRRTDSSASSNPVPNLDKTNHLVHKKKEMFSTSVVGSWMDHSQSFNDVKVVPQKPEESTKISRKRAKPGESTRPRPKDRQQIQDRIKELRGIIPSGGKCSIDSLLERTIKYMTFLQGVTKYADKLQEPKSPKLIEEANNMVEKNKSVGESDIKGGSGGVTWAFEVAGQKMACPIIVEDMNQSGQMLIEMLCEEQGLFLEIAEIIRGFGLNILKGKMEIRDNKLWGRFIVEASRHVTRIDVFWYLVQLLPQTSSASEMDNYEKIDTALPAAVAMT 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1236 764 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 569 611 IPR036638 GO:0046983
Mibi12g1236 764 MobiDBLite consensus disorder prediction 483 514 - -
Mibi12g1236 764 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 60 154 IPR025610 -
Mibi12g1236 764 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 10 748 IPR043561 GO:0003700|GO:0006355
Mibi12g1236 764 MobiDBLite consensus disorder prediction 492 507 - -
Mibi12g1236 764 MobiDBLite consensus disorder prediction 543 572 - -
Mibi12g1236 764 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 556 605 IPR011598 GO:0046983
Mibi12g1236 764 MobiDBLite consensus disorder prediction 536 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1236 Mibi-ChrMibi12 27956744 27960183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1236 472 741 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 44.251 7.65e-63 221