Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1233 ATGGGTTCCGGCGTTGGTTTGTCTGCTGGTGATTTTGAGAACGGTGAAGCTGATTTTGTGGAGAAAGATCCTACTGGACGTTACATTAGGTATGATGATGTGCTGGGGAGAGGAGCATTCAAGACTGTATATAAGGCATTTGATGAAGTTGAAGGGATAGAAGTTGCCTGGAACCAAGTTAATATTGAAGACGTCTTGCAGTCTTCACAACAATTGGATATGTTATATTCTGAGGTACATCTCCTGAAGTCATTGAACCATGAAAACATCCTCAAGTCCTATTATTCTTGGGTGGATGATTCAAACAAGACTATTAACATGATAACTGAGCTACTAGTCTCTGGGAGTTTGAGGCGATATCAAAGAACTCATAAGAATGTCGCATTGAAAGCTATCAAGAACTGGGCAAGGCAAATTCTGCAAGGTTTATGCTATTTGCATAGCCACAATCCTCCTATCATCCATAGAGATTTGAAATGTGATAATATTTTTATTAATGGTCATAATGGAGAAGTTAAGATTGGAGATCTTGGATTGGCAACTGTCCTACTGCAACCTACTGCACAGAGTGTCATTGGGACACCAGAATTCATGGCTCCTGAGCTTTATGAAGAAGAGTATAATGAACTTGCCGACATATATTCTTTTGGTATGTGCATGTTAGAAATGATCACTTGTGAGTACCCATATAGCGAATGCCAAAATCATGCACAGATATATAAGAAAGTTACCTCTGGAATAAAGCCTGCTGCTCTTAGTAAAGTGACCGATCGACAAGTGAAGCAGTTCATAGAGAAATGTTTAGTTCCCGCATCTTTGAGATTGTCTGCATCTGAGCTATTGAATGATCCGTTTCTTGCTACTGACTACATGAAGGAGATCAACCATGTTCCACAGTTGCCCAATCACATGGCAGAATTGGTGACACCACCAAGAACTGAGCCTCGGCCAATGGAGATTGATCAAAGTGTCAGGGATATTTTACTTGACCCCTGTTTGGAGGTTACTGAAGAAACTCCTCAAACATTAACTCTGGACTTAGTTAGGAAGAATAAGAGTACTGAATTCAGGTTACAAGGGGAGAAAAATGCTTTGAACAGAACAATTTCACTTGATCTGCTTATTTCTGAGGCAAATGGTCATGCGAGGAATATCCACTTTCCATTCTTTCTTGATTCTGATACAGCAATTTCAGTTGCTGAGGAGATGGTATCAAGTTTGGGTCTCAATTCTGAGGACGTTAGTGTCATTGCCGAACTATTACACACCATGAGTATTAGGCTTGTTCCTGACTGGAGAGTGTCACATCAACAATTGTCATCTTTAGCAGATTGTTTGGATGGCCATTCTCATGTAGTTTCAAATGGGGCATCATCTTTAAGATGCCATAGTGATGAGGAACTTATTAATTCACTGGTTCTTTATGATCAAGAGAAACAGGAATCAGTTATGTCAGGCATTTCAGCAGAAGATGAGATTACTAAACACTTTCAACCTGATTATACCCACTTTGATGGATCTTGTGAAGACTCCATTGTTGAAAGGTCCAATTCAGATGTTAATGGTGATGGCTCTTCTAACATGAATGGTTTTGATAACTCAGTGAACTCAACCGTCTCATTTGTTTATCCATATGGCGGGGATGAGGCCAAGAATTTTGACCTGGCAGGCATCAATTCTCTTTATCTCGAAGACAACGACCAATGTCACGAGCTGCTATCGGAGGTTGAGACAATAAATACCCAGTACCAACAATGCTTTCTTGAACTTGCGAAGATGAGGGAGGATGCAATAGAAAACACAAAAAGGAGATGGATTACAAGGAAGAAAATATTCGTGATATGA 1845 0.4 MGSGVGLSAGDFENGEADFVEKDPTGRYIRYDDVLGRGAFKTVYKAFDEVEGIEVAWNQVNIEDVLQSSQQLDMLYSEVHLLKSLNHENILKSYYSWVDDSNKTINMITELLVSGSLRRYQRTHKNVALKAIKNWARQILQGLCYLHSHNPPIIHRDLKCDNIFINGHNGEVKIGDLGLATVLLQPTAQSVIGTPEFMAPELYEEEYNELADIYSFGMCMLEMITCEYPYSECQNHAQIYKKVTSGIKPAALSKVTDRQVKQFIEKCLVPASLRLSASELLNDPFLATDYMKEINHVPQLPNHMAELVTPPRTEPRPMEIDQSVRDILLDPCLEVTEETPQTLTLDLVRKNKSTEFRLQGEKNALNRTISLDLLISEANGHARNIHFPFFLDSDTAISVAEEMVSSLGLNSEDVSVIAELLHTMSIRLVPDWRVSHQQLSSLADCLDGHSHVVSNGASSLRCHSDEELINSLVLYDQEKQESVMSGISAEDEITKHFQPDYTHFDGSCEDSIVERSNSDVNGDGSSNMNGFDNSVNSTVSFVYPYGGDEAKNFDLAGINSLYLEDNDQCHELLSEVETINTQYQQCFLELAKMREDAIENTKRRWITRKKIFVI 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1233 614 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1233 614 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 383 422 IPR024678 GO:0004674|GO:0005524
Mibi12g1233 614 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
Mibi12g1233 614 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1233 614 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1233 614 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Mibi12g1233 614 Gene3D - 367 450 - -
Mibi12g1233 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Mibi12g1233 614 SUPERFAMILY Protein kinase-like (PK-like) 24 311 IPR011009 -
Mibi12g1233 614 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Mibi12g1233 614 CDD STKc_WNK 27 286 - -
Mibi12g1233 614 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 15 485 - -
Mibi12g1233 614 Gene3D Transferase(Phosphotransferase) domain 1 112 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1233 Mibi-ChrMibi12 27937270 27939898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1233 1 613 MAP Kinase Kinase Kinase AT5G41990 51.060 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mibi12g1233 Pkinase 5.1e-52 CL0016