Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1230 ATGGGAAGAATGGGAGGAAATCGCAGTAATTATTCGGCTAATCCTTCTGATTATAGGCTTCTCGAAGAGGTTGGTTTTGGTGCTAGCGCCACCGTTTTCCGCGCGATCTATATTCCTCTCAATGAACTCGTTGCTGTCAAGTGTTTGGATCTCGATCGCATCAATTCTAATCTGGATGACATACGGCGGGAGGCTCAAACAATGAGTCTGATTGATCACCCTAATGTTGTGAGGGCATTTTGTTCATTTGTTGTTGAGCGAAATCTTTGGGTGATCATGCCATTCATGGACGAAGGTTCTTGTTTACACCTAATGAAGATAGCGTATCCTGATGGATTTGAAGAGGAAGCTATTGGTTCTATTTTAAAAGAAACTCTTAAGGCATTGGAGTACCTTCATCGACAAGGGCATATTCATCGTGATGTTAAGGCTGGAAATATTTTACTTGATAGTAAAGGGACTGTGAAGCTTGCTGACTTTGGTGTTTCAGCTTGCTTGTTTGATACTGGTGATAGGCAACGATCAAGAAATACTTTTGTTGGAACTCCTTGCTGGATGGCACCAGAGGTATTGCAACCAGGGAGTGGCTACAATTTCAAAGCTGATATTTGGTCTTTCGGAATTACGGCACTAGAGTTGGCTCATGGTCATGCTCCTTTTTCAAAATATCCTCCAATGAAGGTTCTTCTAATGACCATCCAAAATGCCCCTCCTGGACTTGATTATGATCGTGATAAAAAGTTCTCGAAGTCTTTTAAGGAAATGGTTGCTATGTGCTTGGTCAAAGATCATACAAAGAGGCCAACAGCAGAGAAGTTGTTGAAACACTCCTTCTTCAAAAATGCTAAGCCTCCTGAACTTTCTGTGAAAAAATTATTTGCTGACTTACCTCCTCTTTGGAATCGTGTGAAAGCTCTTCAGCTTAAAGATGCGGCTCAACTAGCTCTGAAGAAAATGCCTTCTGCAGAACAAGAAGCATTATCACAGAGTGAATATCAGCGAGGAGTAAGTGCATGGAACTTTGATATTGAGGATTTGAAAGCTCAAGCTTCATTGGTAAGGGATGATGACGACATTTTGGAGATGAGGGAAGAGGATGAAAACAAGTTCTTCATCAATTATAAGGATGCAAATGATTCCCAATCTATTACTGGGAAGAAGAATTTAGATAATTTACCTCCGGATGAGTTCATGTCACTACCAGATAGTAATGATGTGAAACAGAGTGAGAGCTTGGACAAAAAGGGTAAGATTGTTGAAAGTGATCTTCAGGAACTTGGATCTTCTAAAAATATTATTTGGAAAAGAAACGGATCAGTTTCTGAGGCAACAGCGTCCACATCGGAGAAGGATATTGGGACAAGTAAGAATAGATCTCAATCATTGAAAAGTCGTCAGACCCAAAGTGGGCCACTGGTTCCTGGAGCTGTGATTGGTCAGTCTTTATCAGAAAGGGGTCGCTCCTCAGAAAGGCTTGAGAATGAAAATCAGCCATCAGGTGAGAAAGTTATTCGTGAAGTACGTAAAGCTCCAAGCTTTAGTGGTCCTTTGATGCTGCCAAACCGAGCTTCAGCAAATAGTTTATCGGCTCCAATAAAAAGTTCAGGAGGATTCAGAGATTCCTTGGATGATAAGTCAAAGACTAATCTTGTGCAGATTAAAGGGAGATTCTCAGTAACGTCAGAAAATTTAGATCTTGTCAAGGATATTCCTTTAAGTTCAGTTCCACGCCGATCTTCACAGGGATCACCACTGCGGAAATCTGCCAGTGTTGGTGATTGGATGGCAGATTTTAGACAAATGCCAACTGGTCAGTCCGCCAAAGATTCTGCCAATACCAACATTCCTGCATCACTTTTTGTGACTCACCTTCAGAATCTTTTCCAGCAGACAACTATTCAACAGGATCTTATCATGAATTTGTTAAATAGCATGCAACCAGCTGACGTAGCTGACGCTTTGAATGGAAAGTCGCCGCCTCCAGGATATCGCAGTTCAGAGAACAATGGAATTGTTGACTCAGCAGCTTCAGAGAGGGAACGCCTGCTGCAAGACAAAGTTGCAGAACTACAGGCCAGGTTATTTGATTTGTCAAAGGAGTTGACTGCTGAGCAGTTAAAACAGATACAGTTACAACAACAGATAACGTCTCTCTCCAGTGGGGATCATGGGGAAATAAGGGAAGAAGTAGCATGA 2196 0.418 MGRMGGNRSNYSANPSDYRLLEEVGFGASATVFRAIYIPLNELVAVKCLDLDRINSNLDDIRREAQTMSLIDHPNVVRAFCSFVVERNLWVIMPFMDEGSCLHLMKIAYPDGFEEEAIGSILKETLKALEYLHRQGHIHRDVKAGNILLDSKGTVKLADFGVSACLFDTGDRQRSRNTFVGTPCWMAPEVLQPGSGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDHTKRPTAEKLLKHSFFKNAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWNFDIEDLKAQASLVRDDDDILEMREEDENKFFINYKDANDSQSITGKKNLDNLPPDEFMSLPDSNDVKQSESLDKKGKIVESDLQELGSSKNIIWKRNGSVSEATASTSEKDIGTSKNRSQSLKSRQTQSGPLVPGAVIGQSLSERGRSSERLENENQPSGEKVIREVRKAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSKTNLVQIKGRFSVTSENLDLVKDIPLSSVPRRSSQGSPLRKSASVGDWMADFRQMPTGQSAKDSANTNIPASLFVTHLQNLFQQTTIQQDLIMNLLNSMQPADVADALNGKSPPPGYRSSENNGIVDSAASERERLLQDKVAELQARLFDLSKELTAEQLKQIQLQQQITSLSSGDHGEIREEVA 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1230 731 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1230 731 CDD STKc_OSR1_SPAK 16 279 - -
Mibi12g1230 731 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 9 708 - -
Mibi12g1230 731 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 99 329 - -
Mibi12g1230 731 FunFam Serine/threonine-protein kinase BLUS1 7 95 - -
Mibi12g1230 731 MobiDBLite consensus disorder prediction 651 670 - -
Mibi12g1230 731 Gene3D Transferase(Phosphotransferase) domain 1 99 329 - -
Mibi12g1230 731 MobiDBLite consensus disorder prediction 382 414 - -
Mibi12g1230 731 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Mibi12g1230 731 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1230 731 MobiDBLite consensus disorder prediction 439 474 - -
Mibi12g1230 731 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1230 731 Coils Coil 680 707 - -
Mibi12g1230 731 MobiDBLite consensus disorder prediction 439 503 - -
Mibi12g1230 731 SUPERFAMILY Protein kinase-like (PK-like) 16 333 IPR011009 -
Mibi12g1230 731 MobiDBLite consensus disorder prediction 486 503 - -
Mibi12g1230 731 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1230 Mibi-ChrMibi12 27899372 27907552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1230 11 719 MAP Kinase Kinase Kinase Kinase AT4G10730 63.994 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Mibi12g1230 Pkinase 3.1e-60 CL0016