Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1207 ATGAAAGGGCGCTCGCATCGCCTGCAGAGTTCGGACCCTCCCGACGATTGGATTAATGGTTCTTGGACTGTGGATTGTGTATGTGGTGTGAATTTTGACGATGGGGAGGAGATGGTGAATTGTGACGAGTGTGGTGTGTGGGTGCACACTCGTTGCTCTCGATATGTTAAAGGGGATGATATGTTTGTGTGCGATAAGTGCAAGAGCAAGATTAATCGTTCCGATACTGAGGAAACCGAGGTGGCTCAATTGTTAGCTGAGCTCCCTACGCAGCCCGTGAGAATGGAGAATTCACTTGCACCTAATGTAGCTCCTCGGCGTACTTTCAAGCTTTGGACTGATATGCCTATGGAGGAGAGGGTGCATATTCAAGGGATTCCTGGAGGCGATCCTTCGCTTTTTGGGGGACTGTCCTCGATTTTTAATCGGCAGCTGTGGAAGTGCACTGGGTATGTTCCCAAACGGTTTAATTTTCAGTATAAGGAATTTCCCTGCTGGGATGATAATTCTACTAGGGAGGAGGATAATGAGAACCCTGTTAATAAAGGGGCTGGAGTTTTATTTTCCCTGTCAAAGGAGAGTGTATCGGCTACCCCTATTGCAACTTTAGTTGACATGAGATCTAGGGAGGGAGAAGATGGTTCTGATGTGAAGAAGTCTTTAAAGGAGATGGATAAGTGTGATAGTGAAGATGCAGAAGCTATAAGGCAAGCCCAGAATGTCATGAAAAAGGAGAGAAGTTTGCTTCGGTCTGTTGTACATTCAGGCAAGCAGAAAAAAGAAGAATCTGGAACATCCAAAGATCGCAGTGGGAAGAAGAGGATTAAAACTTCAGACAAAGAGGCAGATCCCAAGAGGAGAACTTCACTTACTTCGAAAACAGCATTTACACCCACCAGTGATGCAAAACAATTGGAATTTTATGAAGACAGAAGTCTGAAGAATTTCAAGACTGATACCTGGAGCTTAAAGAACAAAACTTTGAAAGACGTTGTGGTTCAGGAACATGTTTCAAATAATTACTTTGTTGTGGATACCATTATGGAGGAGCCAAATATCAACTCAGCGACTACTGAGGATTCTTCAGAAGCCTTATATCCTGACACGGCAGGACATAGTTTTTCAGTTGGACCAGAAATAGCTGAAGATAAAACTGAAAATAAAGCTCCTTCTGTTACTGAAATTTTTTCCAAGACTGGTGATAACATTTCATCATATTTAAAGAATAATTCTGCTGTAAACGCTTCAATTAAAGAGCAGAAGGGAGATGGCATGGCGGTTAATAATGCAGATGATAGTATAGTAATAAGAAGTGCAAGGAGTCCTGCAGAAGATCCTTGTGGTCCTGCACCACCAGAACACAAGGATAAGCAGGATTCCCAAGATTTTGACTATGAAAAGTGTCCTAGCTCTGGACAGAGCAATCTTAAGGTGAAGAGAGAAGGGGGTGATGATATTGTTGGGAAGCGTTTGATTTCTCATTCTTCTAGCATAAATGATCTGAAATGCAATGAGAAACTTCCTAAACACAAATCTGATCTTGCTAATGAGTGTGTGGTGACCAATTCATCCAATGAAAATAAGGTGGAAGATGGTTACAGGAAATCAGAAGCAATCATTGATTGCCGTGTCGATAATTCTGAGGCATTATCATGTCATTTTTGTCCTGTAAAACAAGAAATGGCAGGGTCTGAAGGTCCCATGGAAGCAGAGAAGGGTTTTTCAGAAATAGAAGACGGTTCTGGCAATGCTGAGGATCCATCAAAATCTGAAACTACATTGTGTCCTCATAAAATGTTATCATGTCTCGGGAAGTCATCTTTAAGTTCCTCAACTATGAATCCAAAAATTCCTGCCAGTGACCAAAAGTCTGAACAGACTGAAAATCCTAACCCTCTTGTCAAGCATGGAGTAATGGAAGATTGCAACACGTACAATAAGAAAGAAAGTAATCGAAATGATATTGTGAGGGACGAAGGTCCTCGGAAATCTCAAAAAGAACGTCTAAAATCATCTTCAACTTCTAATTTGAAAGCTATGCATTCAAGCAAAAGTGCACATGCTGTTTTAAGGCAAGTCAGTGCAGATTCAAAAGATTTTGTTAACAGTTCATCTTCTAAAGCGTCTTTGATTCATCAAACTGGAACTAATTTAGGCTTGAGTGAATCTGATGAATCATCACTACACCAAAAGTCTTTGCATGCATCAAATAAGTCATCTTCGATACCACAGAAGGCTGAAAAGAATAATCAGACAAACCTCCAACCTTCCTCTAAGGCAAATCAGAATCCCATGCCATCACCTTCACCAATATCTAATTCTTCTGCGATGTTAAGTGATGAGGAGCTTGCTCTACTATTGCATCAAGAATTAAATAGCTCTCCCCGAGTTCCTCGTGTACCCCGAGTACGTCATGGGGGTAGCTTGCCACAGATAACCTCTCCTAGTGCTGCAAGCATGCTATCAAAGCGCACATCATCTGCTGGAGGAAAGGATTATTGTTTGTTTTCTAGGAGAAAATACAAGGATGCATCTAGAGATGGGCTTTGCAGTTCCCGTGAGCTTGAAGATGAAACTAAAAGGATGGAGAATGCATCATCTTCCTTTGATAAGAAGAAAAAAGATAAGGAATGTGTGGAAGATGCTTCTGTAATGGAAGGCCACATATCTACGGCAACAATAAATTCTACAACAAAGAATGTTGGTCCTGCCTCTGCTGCCACTGTAAATGGTAGTTCAGCCTCCCCTTGTGAGGATCAAAACGTGCCATTTACACGCAACTCGCCAAAAAATATATCTGACGATGATAATGGAACTGTTGGAAGGCCAGCCCATCGCACATTGCCTGGCTTGATCAATGAGATTATGAGTAAGGGTCGTCGGATAACATATGAGGAACTATGTAATGCTGTGCTGCCGCACTGGAATAACTTGAGGAAGCATAATGGAGACCGCTATGCTTACACAAGTCACTCTCAAGCTGTTCTTGATTGTTTGAGGAACCGACATGAATGGGCAAGGTTGGTTGACCGCGGTCCAAAGACAAATTCAACTAAAAAGAGGCGAAAGTTTGATGAAGAATCTGATGATAATGTAACCAGCAAGGGCAAAAGTACGAAAGGGGGTGAAGGGAAGAATTTTGACTTACAGAAGAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGGAAGCGCAGGCGTCTTGCTCTTCAAGGGATAGCAGTTAAGGATGCCCGGAGAAGAAAGGCTGATTCACTTACTGATGAAGATGTTGGTCCATTCTCTGATTCTAGTGAGGAGAGCGAATTTAGCGAGGATGAAATTCAGGATGGTAGAGCGGGTCAAGTGGGAAGTGAAGATTCTGATAGTTCAGACGAGGCAGGTAGCGCCCAATAG 3396 0.4229 MKGRSHRLQSSDPPDDWINGSWTVDCVCGVNFDDGEEMVNCDECGVWVHTRCSRYVKGDDMFVCDKCKSKINRSDTEETEVAQLLAELPTQPVRMENSLAPNVAPRRTFKLWTDMPMEERVHIQGIPGGDPSLFGGLSSIFNRQLWKCTGYVPKRFNFQYKEFPCWDDNSTREEDNENPVNKGAGVLFSLSKESVSATPIATLVDMRSREGEDGSDVKKSLKEMDKCDSEDAEAIRQAQNVMKKERSLLRSVVHSGKQKKEESGTSKDRSGKKRIKTSDKEADPKRRTSLTSKTAFTPTSDAKQLEFYEDRSLKNFKTDTWSLKNKTLKDVVVQEHVSNNYFVVDTIMEEPNINSATTEDSSEALYPDTAGHSFSVGPEIAEDKTENKAPSVTEIFSKTGDNISSYLKNNSAVNASIKEQKGDGMAVNNADDSIVIRSARSPAEDPCGPAPPEHKDKQDSQDFDYEKCPSSGQSNLKVKREGGDDIVGKRLISHSSSINDLKCNEKLPKHKSDLANECVVTNSSNENKVEDGYRKSEAIIDCRVDNSEALSCHFCPVKQEMAGSEGPMEAEKGFSEIEDGSGNAEDPSKSETTLCPHKMLSCLGKSSLSSSTMNPKIPASDQKSEQTENPNPLVKHGVMEDCNTYNKKESNRNDIVRDEGPRKSQKERLKSSSTSNLKAMHSSKSAHAVLRQVSADSKDFVNSSSSKASLIHQTGTNLGLSESDESSLHQKSLHASNKSSSIPQKAEKNNQTNLQPSSKANQNPMPSPSPISNSSAMLSDEELALLLHQELNSSPRVPRVPRVRHGGSLPQITSPSAASMLSKRTSSAGGKDYCLFSRRKYKDASRDGLCSSRELEDETKRMENASSSFDKKKKDKECVEDASVMEGHISTATINSTTKNVGPASAATVNGSSASPCEDQNVPFTRNSPKNISDDDNGTVGRPAHRTLPGLINEIMSKGRRITYEELCNAVLPHWNNLRKHNGDRYAYTSHSQAVLDCLRNRHEWARLVDRGPKTNSTKKRRKFDEESDDNVTSKGKSTKGGEGKNFDLQKKEEFPKGKRKARKRRRLALQGIAVKDARRRKADSLTDEDVGPFSDSSEESEFSEDEIQDGRAGQVGSEDSDSSDEAGSAQ 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 1116 1131 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 1010 1056 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 1070 1089 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 670 690 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 440 480 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 245 296 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 449 464 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 796 824 - -
Mibi12g1207 1131 SMART PHD_3 25 68 IPR001965 -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 717 775 - -
Mibi12g1207 1131 PANTHER UNCHARACTERIZED 1 1116 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 206 229 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 905 935 - -
Mibi12g1207 1131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 75 IPR013083 -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 1010 1131 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 905 945 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 641 669 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 247 288 - -
Mibi12g1207 1131 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 809 824 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 606 690 - -
Mibi12g1207 1131 MobiDBLite consensus disorder prediction 606 631 - -
Mibi12g1207 1131 SUPERFAMILY FYVE/PHD zinc finger 14 72 IPR011011 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1207 24 67 PHD Transcription Factor Family AT5G22260 42.553 8.24e-06 48.1