Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1199 ATGCCACAGAACTCCATAGCACCAAAACCAGAATACTGCAGTAGTAGCCCTGTAGGAGAAGAAGCGCAAGAGATGTCAGAGCCCCATAACTCTACTGTCCTTCCATACCCTGTACAGACCAATGAACACTCTTTACCAAAAATGAATTTGTACCCAATTACTCTGAAGTTTGAGGAACTGGTTTACAAAGTTAAACTAGAGCAGAAAGGACAGTGTTGGGGTGGTTCATGGAATTCCAAGGAGAAGACCATATTGAATGGGATTACAGGTATGGTTTGCCCAGGAGAAATACTGGCCATGCTGGGCCCCTCTGGCAGTGGGAAAACCACACTTCTTACGGCTCTTGGAGGTCGTCTCAATGGTAAATTATCTGGGAAGATCACATACAACAACCAACCTTTCTCAGGTTCCATAAAGAGAAGAACAGGATTTGTGGCTCAGGATGATGTTCTATACCCTCATCTGACTGTTTTTGAGACTCTATTGTTCACTGCACTTTTGAGGTTGCCTAACAGCTTGACTAGAGACGAAAAAACCGAGCATGTAGAGCGGGTTATTGTCGAGTTAGGACTGACTCGGTGCAGGGGAAGCATGATAGGAGGCCCACTTTTCAGAGGAATATCAGGTGGAGAAAAAAAGAGGGTGAGCATAGGTCAGGAAATGCTCATCAATCCAAGCCTTTTGCTGCTAGATGAACCCACCTCAGGTTTGGACTCTACCACAGCTCAGAGGATCCTAAACACAATCAAACGTCTAGCTAGTGGAGGTAGAACTGTTGTGACCACCATACACCAACCATCTAGTCGTCTCTACTACATGTTTGATAAGGTAGTCTTGCTATCTGAAGGCTGCCCCATCTATAACGGTCCTGCTACTACAGCCTTGGAGTACTTTACATCCATTGGTTTTTCCACATCCATGACTGTCAATCCAGCTGATCTCATGCTTGATCTTGCTAACGGGATTGCCCCGGACTCCAAGAATGCATCTGACCAAAGTGAGAGCCTGGAGCAAGAAAGGAAACTAGTCAGGGAAGCACTGATTTCCGCTTATGACAAGAACATAGCAACAAGGTTGAAAACTGAGCTTTGCAGCACGAATGTGATCAACTACAATATCACAAAAGATACTTCTGCAAAAAGTGACATAAAACCAGAGCAATGGTGCACAAATTGGTGGTACCAGTTCAAGGTACTGTTACAGAGGGGCCTAAGGGAGAGAAGGTATGAAGCTTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTCGCTTTTCTTGGTGGACTCTTATGGTGGCATACACCAGAATCACACATTCAAGACCGGGTTGCCTTGATCTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTTCCCCAAGAAAGAAGAATGCTGATCAAGGAACGGTCATCAGGAATGTACCGCCTTTCATCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCATTGGAGCTGGCTCTTCCAACTGCATTTGTCTTCATACTCTACTGGATGGGAGGGCTTAAACCTCACCCTGTGACATTCATCCTTTCCCTTCTTGTGGTTCTTTACAGCGTTCTTGTCTCTCAAAGTCTCGGCTTAGCATTTGGTGCTATACTTATGGAGGTCAAGCAGGCCACGACCTTAGCTTCTGTCACAACCCTTGTATTTCTCATTGCTGGAGGATACTACGTACAACAAATCCCTCCCTTCATAGTGTGGTTCAAGTACTTAAGCTACAGCTACTATTGTTACAAACTCCTTCTTGGTGTCCAGTACAATGACAATGATGTTTATGAGTGCTCAAAGGGTGTCTTGTGCAGGGTTGGAGATTTTCCTCCGATCAAATCAATGGGTTTGAACCATCTGTGGGTTGATGTGGCCATTATGGCTTTGATGTTGGTAGGTTATCGACTTGTTGCTTACATGGCACTACATAGAGTGAGCTCTCCTGAGTTGGATTTATCAGAGACCTTTTCTCACCGTTTTAGGAAATGCTAA 2022 0.4456 MPQNSIAPKPEYCSSSPVGEEAQEMSEPHNSTVLPYPVQTNEHSLPKMNLYPITLKFEELVYKVKLEQKGQCWGGSWNSKEKTILNGITGMVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKITYNNQPFSGSIKRRTGFVAQDDVLYPHLTVFETLLFTALLRLPNSLTRDEKTEHVERVIVELGLTRCRGSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYNGPATTALEYFTSIGFSTSMTVNPADLMLDLANGIAPDSKNASDQSESLEQERKLVREALISAYDKNIATRLKTELCSTNVINYNITKDTSAKSDIKPEQWCTNWWYQFKVLLQRGLRERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIQDRVALIFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFILYWMGGLKPHPVTFILSLLVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYVQQIPPFIVWFKYLSYSYYCYKLLLGVQYNDNDVYECSKGVLCRVGDFPPIKSMGLNHLWVDVAIMALMLVGYRLVAYMALHRVSSPELDLSETFSHRFRKC 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1199 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 300 IPR027417 -
Mibi12g1199 673 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 307 IPR003439 GO:0005524
Mibi12g1199 673 FunFam ABC transporter G family member 22 72 301 - -
Mibi12g1199 673 CDD ABCG_EPDR 52 289 - -
Mibi12g1199 673 Pfam ABC-2 type transporter 394 600 IPR013525 GO:0016020|GO:0140359
Mibi12g1199 673 Coils Coil 326 346 - -
Mibi12g1199 673 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 30 649 - -
Mibi12g1199 673 Pfam ABC transporter 85 235 IPR003439 GO:0005524
Mibi12g1199 673 MobiDBLite consensus disorder prediction 19 36 - -
Mibi12g1199 673 Pfam ABC-2 type transporter 264 359 IPR043926 GO:0140359
Mibi12g1199 673 Gene3D - 74 301 IPR027417 -
Mibi12g1199 673 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524|GO:0016887
Mibi12g1199 673 SMART AAA_5 94 284 IPR003593 -
Mibi12g1199 673 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1199 Mibi-ChrMibi12 27495324 27498487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1199 84 283 Calmodulin-binding Proteins AT2G36910 28.846 2.81e-12 68.6