Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1195 ATGCCCCCCAATCTCTATAAGCTCGCCCTCTCAACCCATCTTCTACCTTTCTTCCAATCTCATTGACTACACACCCGACTAAAGCAAAGTAACCCTAGCTTCCGAAGAACGTTGCCACCACGCGACCAAGCATCTCTCTTTGCTGATCACCGCCCCCAAATCTCTGCTCAAGAGATGGCCGATCGGTTAACTCGTATAGCTATCGTCAGCGATAGGTGCAAGCCTAAGAAGTGCCGCCAGGAATGCAAGAAGAGTTGTCCTGTTGTGAGAACCGGTAGATTGTGTATTGAGGTTACTGACAAATCTAAAATTGCTTATATATCTGAGGAACTGTGCATTGGGTGCGGTATTTGTGTCAAGAAATGTCCATTTGAGGCCATCCAAATTATCAACCTGCCAAAGGACCTGGACAAAGACACGACTCACAGATATGGTCCTAACACTTTTAAATTACATAGGTTGCCAGTACCTAGGCCGGGTCAAGTTCTTGGTTTGGTTGGAACAAACGGAATTGGAAAGTCCACTGCTCTTAAAGTTCTTGCTGGAAAATTGAAACCAAACTTGGGCCGTTTCAATAACCCACCCGACTGGCAGGAAATCTTAACCTATTTTCGAGGATCTGAACTACAAAACTATTTCACTCGCATCCTTGAGGATGACTTGAAGGCTATTATAAAGCCTCAATATGTTGATCACATCCCTAGAGCTGTGCAAGGGAATGTGCAGGAGACGCTGGACCAGAAAAATGAGAGAGATATGAAGCAAGAACTTTGTAATGATCTTGACCTAAACCAGGTTATAGATCGTAATGTTGGCGATCTTTCTGGTGGGGAGCTCCAAAGGTTTGCCATTGCAGTTGTTGCCATCCAGAATGCTGAAATATACATGTTTGATGAACCTTCTAGTTACCTTGACGTAAAACAAAGGCTGAAAGCTGCCCAAGTTATTCGATCTTTACTCAGGCCTAATAGCTATGTAATTGTTGTCGAGCATGATCTTAGTGTCTTGGACTACTTGTCAGACTTTATTTGCTGTTTATATGGCAAACCTGGTGCATACGGAGTTGTAACACTTCCCTTCTCAGTCAGAGAAGGTATTAACATCTTCTTGGCTGGTTTTGTCCCAACAGAAAATCTGAGGTTCCGGGATGATTCGCTTACCTTCAAGGTTGCTGAGACTCCGCAAGAGACTGGCGATGATGCTCAAACATATGCTAGATACAAATACCCAACAATGACTAAAACTCAAGGAAATTTCAGGCTTCGTGTTGTTGAAGGAGAATTTACTGATTCTCAGATTATTGTGATGCTGGGTGAGAATGGGACAGGAAAGACGACATTTATTCGTATGCTGGCTGGTTTATTGAAACCTGACTCCATAGAAGGTGGCTCTGACACAGAAATGCCCGAGTTTAATGTGTCGTATAAGCCTCAGAAGATTAGCCCAAAGTTCCAATCAACAGTCAGACACTTGCTCCATTCAAAAATACGTGATGCATACACACACCCGCAGTTCATCTCAGATGTGATGAAGCCACTTCTTATTGAACAGTTGATGGACCAAGAGGTTGTTAATCTTTCCGGTGGAGAGTTGCAAAGAGTTGCATTATGTCTTTGTCTTGGAAAGCCTGCAGACATCTATTTGATAGACGAGCCCAGTGCATATCTTGATTCTGAGCAGCGTATTCATGCTGCCAAAGTCATTAAGAGGTTTATCCTCCACGCAAAGAAAACTGCGTTTGTGGTTGAGCACGATTTTATCATGGCAACATATCTTGCTGATAGAGTTATCGTTTATGAGGGGTCTCCTTCTATTGATTGTACTGCTAATGCACCACAATCATTGTTGACTGGGATGAACCTATTCTTATCACACCTGGATATTACCAGAAGTCAGCTGGCTCATACTATTATCTTGACGACTAAGTTTATAGTTGTGGACAGTTGA 1947 0.4304 MPPNLYKLALSTHLLPFFQSHXLHTRLKQSNPSFRRTLPPRDQASLFADHRPQISAQEMADRLTRIAIVSDRCKPKKCRQECKKSCPVVRTGRLCIEVTDKSKIAYISEELCIGCGICVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDDLKAIIKPQYVDHIPRAVQGNVQETLDQKNERDMKQELCNDLDLNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDVKQRLKAAQVIRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDDSLTFKVAETPQETGDDAQTYARYKYPTMTKTQGNFRLRVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSIEGGSDTEMPEFNVSYKPQKISPKFQSTVRHLLHSKIRDAYTHPQFISDVMKPLLIEQLMDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIHAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYEGSPSIDCTANAPQSLLTGMNLFLSHLDITRSQLAHTIILTTKFIVVDS 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1195 648 CDD ABC_RNaseL_inhibitor_domain1 135 389 IPR034348 -
Mibi12g1195 648 Pfam 4Fe-4S binding domain 106 128 IPR017896 -
Mibi12g1195 648 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 103 132 IPR017896 -
Mibi12g1195 648 Gene3D - 394 638 IPR027417 -
Mibi12g1195 648 PRINTS ABC transporter family E signature 213 239 IPR013283 -
Mibi12g1195 648 PRINTS ABC transporter family E signature 164 189 IPR013283 -
Mibi12g1195 648 PRINTS ABC transporter family E signature 197 213 IPR013283 -
Mibi12g1195 648 PRINTS ABC transporter family E signature 81 96 IPR013283 -
Mibi12g1195 648 PRINTS ABC transporter family E signature 136 156 IPR013283 -
Mibi12g1195 648 PRINTS ABC transporter family E signature 109 133 IPR013283 -
Mibi12g1195 648 ProSitePatterns ABC transporters family signature. 526 540 IPR017871 GO:0005524|GO:0016887
Mibi12g1195 648 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 401 626 IPR003439 GO:0005524
Mibi12g1195 648 Gene3D - 52 389 IPR027417 -
Mibi12g1195 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 346 IPR027417 -
Mibi12g1195 648 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 127 372 IPR003439 GO:0005524
Mibi12g1195 648 Pfam ABC transporter 424 554 IPR003439 GO:0005524
Mibi12g1195 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 424 599 IPR027417 -
Mibi12g1195 648 Pfam ABC transporter 159 301 IPR003439 GO:0005524
Mibi12g1195 648 Pfam Possible Fer4-like domain in RNase L inhibitor, RLI 65 94 IPR007209 -
Mibi12g1195 648 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 112 123 IPR017900 -
Mibi12g1195 648 ProSitePatterns ABC transporters family signature. 274 288 IPR017871 GO:0005524|GO:0016887
Mibi12g1195 648 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 59 629 IPR013283 -
Mibi12g1195 648 FunFam ATP-binding cassette, sub-family E, member 1 59 389 - -
Mibi12g1195 648 SUPERFAMILY 4Fe-4S ferredoxins 68 142 - -
Mibi12g1195 648 FunFam ATP-binding cassette sub-family E member 1 392 635 - -
Mibi12g1195 648 SMART AAA_5 159 351 IPR003593 -
Mibi12g1195 648 SMART AAA_5 430 603 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1195 Mibi-ChrMibi12 27437035 27444328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1195 154 336 Calmodulin-binding Proteins AT2G36910 27.979 2.45e-07 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1195 12 27437035 27444328 Mibi12g1195 12 27437035 27444328 ECH