Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1173 ATGAAGCAGCCATCACCGAAATCGAAGCCATGGAGGCCATTAACAGCAAAGTGCTGCTCAACAGAGGACCAAATCACGAAGCTCGGGAAATTCAGCCGATGCAAACCAACTTCACGGTCGGATTTATCGAAGGACGTAGCTCCGATGCCGTCGTTTCGGAGGCTATCATTCTCAGATCTGAGCCGTTCATCGTCGATGAGGATCAACGAGGATCTGGCGCAGTCGTTCGGTTCAGATCTGTACGATTTTCAGTTGAACGAATTGCGAGCGATAACGCAAAATTTCTCGAGCAATTTCTTGCTTGGAGAAGGAGGATTTGGGACTGTGCATAAGGGATACATTGACGATAATTTCCGGCAGGGATTGAAGGCTCAACCTGTCGCCGTTAAGCTTCTCGACATTGAAGGCTTGCAAGGACATCGTGAATGGCTTGCAGAAGTAGTATTTCTTGGGCAGCTAAGGCACCCAAACTTGGTGAAGTTGATAGGATATTGTTGTGAGGAAGAAGAACGGCTCCTTGTGTATGAGTTCATGCCAAGAGGAAGCTTGGAGAATCACTTGTTCAGAAGGATATCATCACTGCCTTGGGCTACCAGATTGAAAATTGCAGTTGGTGCTGCTAAAGGCCTTTCCTTCTTGCATGGGGCAGAGAGTCCAGTCATTTACAGGGACTTTAAAACTTCCAATGTCTTGCTTGATTCTGATTTCACTGCTAAGTTGTCAGATTTTGGATTAGCCAAAATGGGGCCAGAGGGTTCTAAATCTCATGTCACAACCAGAGTCATGGGTACTTATGGATATGCAGCCCCTGAATACATCTCTACGGGTCACTTAACCACAAAAAGTGATGTCTACAGCTTTGGGGTAGTCCTGCTAGAACTACTCACAGGAAGGAGAGCCATGGAGAAGACAAGGCCAAAGACTGAGCAGAGCCTTGTGGATTGGTCAAGACCTTATTTGAGCAGTTCTACGAAGTTGAAGTATATTATGGATCCAAGACTTGCAGGGCAGTACTCTGTGAAGGGTTCAAAAGAGATGGCTCGTTTGGCACAGCAATGCATAAGTCTGAATCCTAAAGACAGGCCAAGGATGCCAACCATTGTTGAAACTCTTGAAAACTTGCAGCAGTTCAAGGACATGGCTATTACTTGTGGGCACTGGCCTGCTTCTGCAAAATCTAGACATGGAGCTTCTGATAATAAGATCAAAATTGATATCAGAGTTGGTGCAAACCACAGGAAGCCCTCTCCTAAAGTTGCAAGCAAGAAAACTTGA 1275 0.4588 MKQPSPKSKPWRPLTAKCCSTEDQITKLGKFSRCKPTSRSDLSKDVAPMPSFRRLSFSDLSRSSSMRINEDLAQSFGSDLYDFQLNELRAITQNFSSNFLLGEGGFGTVHKGYIDDNFRQGLKAQPVAVKLLDIEGLQGHREWLAEVVFLGQLRHPNLVKLIGYCCEEEERLLVYEFMPRGSLENHLFRRISSLPWATRLKIAVGAAKGLSFLHGAESPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRAMEKTRPKTEQSLVDWSRPYLSSSTKLKYIMDPRLAGQYSVKGSKEMARLAQQCISLNPKDRPRMPTIVETLENLQQFKDMAITCGHWPASAKSRHGASDNKIKIDIRVGANHRKPSPKVASKKT 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1173 424 FunFam Serine/threonine-protein kinase BIK1 61 177 - -
Mibi12g1173 424 ProSiteProfiles Protein kinase domain profile. 95 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1173 424 Gene3D Phosphorylase Kinase; domain 1 58 177 - -
Mibi12g1173 424 PANTHER OS01G0588500 PROTEIN-RELATED 62 375 - -
Mibi12g1173 424 ProSitePatterns Protein kinases ATP-binding region signature. 101 130 IPR017441 GO:0005524
Mibi12g1173 424 FunFam Serine/threonine-protein kinase PBS1 178 384 - -
Mibi12g1173 424 Gene3D Transferase(Phosphotransferase) domain 1 178 385 - -
Mibi12g1173 424 CDD STKc_IRAK 101 374 - -
Mibi12g1173 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Mibi12g1173 424 SUPERFAMILY Protein kinase-like (PK-like) 77 372 IPR011009 -
Mibi12g1173 424 Pfam Protein tyrosine and serine/threonine kinase 101 371 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1173 Mibi-ChrMibi12 27026922 27030051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1173 83 387 Glycoside Hydrolase AT3G07070 50.809 1.37e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi12g1173 PK_Tyr_Ser-Thr 2.4e-48 CL0016