Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1171 ATGAAACGGCAATGGCCATGGCTTGTTAATGTTTTGCTGATATGTATTGTAATCACAAAAAATGAAGCAATCAGTCCCGATGGTGAGGCGCTTCTCAGTTTCAGGACAGCGGTTGTTAGCTCAGATGGTATCTTGTTACAATGGAGGCCTGAGGACCCTGACCCATGCAAATGGAGAGGAGTGAAATGCGATCCAAAATCCAAGAGAGTTACAAATCTGAATTTAGCTCGCCATAAGTTGAGTGGATCTATACCACCTGAACTTGGGAGGCTAGAGCATTTGACTGTTCTTGCTCTTCACAACAACAATTTCTATGGGACAATTCCATCTGAATTGGGAAATTGCAGTGAGTTGCAGAGAATATTCTTGCAGGGCAATTACCTTAGTGGACCGATTCCAAGTGAACTAGGAAACCTTTCACAACTCAGAAGTTTGGATATATCAAGTAACTCCCTTGGTGGGAATATACCACCATCCCTTGGGAAACTGTACAATCTAAAAAATTTTAATGTGTCAACTAATTTTCTGGTCGGACCAGTACCTTCTGATGGTGTGCTTGCTAACTTTACTGTAGACTCCTTTGTTGGTAATCGTGGTTTATGTGGAGTGCAAATCAATGTAATGTGTAAAGATGGTTCTCCCGCAAATCAATCTTCAAGCTTGGACCAACAAAATGGAAAGAAGAAATATTCTGGTCGGTTGCTTATCAGTGCATCAGCAACTGTTGGTGCGCTGCTTTTAGTGGCACTCATGTGCTTCTGGGGCTGCTTTCTTTATAAAAAGTTTGGTAAAAATGACCGAAAAAGTCTGGCGATGGATGTTGGTGGAGGAGCTTCAATTGTAATGTTTCATGGAGATCTACCATATTCTTCAAAAGATATCATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATTGGATGTGGGGGATTTGGTACAGTTTACAAGCTCGCAATGGATGACGGAAACCAATTTGCTTTGAAAAGGATTGTTAAGTTGAATGAGGGCTTTGATCGTTTTTTTGGGAGGGAGCTTGAAATTCTTGGAAGCATAAAACACCGTTATTTAGTAAACTTACGAGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGATTATCTGCCTGGTGGAAGTCTTGATGAAGTTCTTCACGAAAAATCTGACCAGCTAGACTGGGATTCACGCTTGAATGTAATCATGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCAAGGGTCATACACCGTGACATAAAGTCTAGTAATATTTTACTTGATGGCAACCTGGATGCTCGAGTCTCTGATTTTGGGCTTGCTAAACTTCTCGAGGATGAAGAATCTCATATTACCACCATTGTTGCTGGAACATTTGGATACCTAGCCCCAGAGTACATGCAAAGTGGTAGGGCAACTGAAAAATCTGACGTTTACAGTTTTGGTGTCTTGGTACTTGAAGTGCTAAGTGGGAAGCGTCCAACAGATGCATCATTCATTGAAAGGGGTCTAAATATTGTTGGCTGGCTGAATTTTCTCATTACAGAAGATAGGCAAAGAGAGATTGTTGATCCCTTATGTGAAGGAGTGCAATTAGAGAGCCTCGATGCTTTGCTCTCTGTGGCTATTCAGTGTGTTTCTTCGAGTCCAGAGGATCGCCCCACAATGCATCGAGTGGTGCAGGTGCTTGAATCAGAAGTCATGACCCCATGCCCAAGCGATTTTTACGACTCCGAGTAA 1755 0.4182 MKRQWPWLVNVLLICIVITKNEAISPDGEALLSFRTAVVSSDGILLQWRPEDPDPCKWRGVKCDPKSKRVTNLNLARHKLSGSIPPELGRLEHLTVLALHNNNFYGTIPSELGNCSELQRIFLQGNYLSGPIPSELGNLSQLRSLDISSNSLGGNIPPSLGKLYNLKNFNVSTNFLVGPVPSDGVLANFTVDSFVGNRGLCGVQINVMCKDGSPANQSSSLDQQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRKSLAMDVGGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGTVYKLAMDDGNQFALKRIVKLNEGFDRFFGRELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHEKSDQLDWDSRLNVIMGAAKGLAYLHHDCSPRVIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKSDVYSFGVLVLEVLSGKRPTDASFIERGLNIVGWLNFLITEDRQREIVDPLCEGVQLESLDALLSVAIQCVSSSPEDRPTMHRVVQVLESEVMTPCPSDFYDSE 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1171 584 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Mibi12g1171 584 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 377 579 - -
Mibi12g1171 584 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 71 570 - -
Mibi12g1171 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Mibi12g1171 584 Pfam Protein kinase domain 303 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1171 584 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 186 - -
Mibi12g1171 584 SUPERFAMILY Protein kinase-like (PK-like) 286 568 IPR011009 -
Mibi12g1171 584 Gene3D Transferase(Phosphotransferase) domain 1 377 575 - -
Mibi12g1171 584 ProSitePatterns Protein kinases ATP-binding region signature. 307 333 IPR017441 GO:0005524
Mibi12g1171 584 ProSiteProfiles Protein kinase domain profile. 301 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1171 584 Gene3D Ribonuclease Inhibitor 25 210 IPR032675 -
Mibi12g1171 584 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 275 376 - -
Mibi12g1171 584 Gene3D Phosphorylase Kinase; domain 1 276 376 - -
Mibi12g1171 584 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Mibi12g1171 584 SUPERFAMILY L domain-like 25 187 - -
Mibi12g1171 584 SMART serkin_6 301 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1171 Mibi-ChrMibi12 27002228 27010838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1171 1 577 Receptor kinase-like Gene Family AT2G35620 74.523 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Mibi12g1171 Pkinase 6.9e-46 CL0016