Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1163 ATGGCCGACAACGACGACTCCTCTCCCCTCTTCACGGCCAACGTCTCCGTCATACTCATCGCCTTAGGCTCCGTCGCACTCGTCGTCACAATGTACCACCTCATCGCCCTCTGCCTCTGCCGCCGCCACGTCACTAACACCAACTCCGACCAGCCACCAGACATCGAAATCCAAGCCGACGAGAATTCACTGGCCCACCTAATCCCCGCACACAAGTACAAGAAGAAGATCTCCCATGATGACGTGGAAGGCGGCGGGGATGCCACGTGTGCGGTGTGTTTGGGGGACTTTGAGGAAGGCGAAGAGGTGAGGACGTTGCCGGGATGTTGGCACTGTTTTCATGTGACTTGTATTGATAAGTGGCTTTTGTCTCACCCCAGTTGCCCGGTTTGTCGTGCCGATGCGACGCCGTCCCCGGTGGTCGTGAGCGCCGTGTCGGAGGCTGTTTCCGGTGAGGAGAGGACAGATGTTGTAGCGCAGAATGCTTTGGTGAATAGTTTTACGTTGCGACGGTGA 516 0.5717 MADNDDSSPLFTANVSVILIALGSVALVVTMYHLIALCLCRRHVTNTNSDQPPDIEIQADENSLAHLIPAHKYKKKISHDDVEGGGDATCAVCLGDFEEGEEVRTLPGCWHCFHVTCIDKWLLSHPSCPVCRADATPSPVVVSAVSEAVSGEERTDVVAQNALVNSFTLRR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1163 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 138 IPR013083 -
Mibi12g1163 171 Pfam Ring finger domain 89 132 IPR001841 -
Mibi12g1163 171 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 136 IPR044675 -
Mibi12g1163 171 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Mibi12g1163 171 SUPERFAMILY RING/U-box 77 138 - -
Mibi12g1163 171 SMART ring_2 90 131 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1163 Mibi-ChrMibi12 26918070 26918585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1163 11 147 C3H Transcription Factor Family AT3G10910 39.189 1.79e-20 82.0