Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1144 ATGGAAAACAAACCAAAGCCAGATCAAGTCGTTCTCTTCATCGACCATCTCAATGCCAGCCCTCCTTCTTCCATGGAAACTCATCACAACAACAATGACACCACCACCACCACCACCACCATCGCCAACAACAAGTCCAACCTCAAGAAACTCACTTCCAAAGTCAAAACCCTTAATCGCCTCAACTTCTCCAAACCCAAATCTCGCATCCAAGAATACAACCACCCACTCCTCTACACCAACTTCACCGTCCCCGAAGAAGCCCAAGACCCGTCCCGTTACTCTTCCACCGACGACGAATGGGACCACGACGATGACGACGAAGAAGACGAAGACCCTGAAGACAACAACAACAACCACCCCAAGTCCCACAAAAAAACCAAACGCCGCCGCAAGAAAATTCAATGGAAACGCGTTCTAGAATGGGCCTTATTCTTCATCATATTAACAAGCCAAGTCTCCTGCATGACAATCCCTTCCATTAAAGCCAAACACTTATGGGGCTTAGAGATTTGGAAATGGTGCCTAATGGCCATGGTCACCTTCAGTGGCCGCCTAGTCTCTGGCTGGCTCGTCGCCGTCTCCGTCTTCATCATAGAAAGAAACTTCATGCTAAGAGAAAAGGTCTTATACTTCATCTATGGCCTAAGAAAAAGCATAAGAAATTGCATGTGGCTTGGCCTTGTCTTATTCTCTTATTGGACCGTTGTCTTTGACAACATCCAGAAAAAAAACCACAAATTCCTCAACAAAGTGTTTCAAGCCCTCGTGGCAGTCCTCGTGGGAGCGATAATCTGGCTAGTAAAGATTGTACTAGTGAAAATGCTTGCATCATCTTTTCATGTGGCAACATACTTTGATAGAATGAAGGAGAGTGTGTTCCATCATTATATATTGGACACACTTTCGGGGCCGCCATTATTGGAGGAGTATGAGGAGTTATCGCAACAAGGCTTGACAGCTTCGAAGTCAATGCCGGCGAGTTGGAAGGGCGCGAAGGATTTGTACAAGTCCAAGAAGTTTGGGTCCAGGAGGCTTGATATGGAGAAGCTCAGGGAACTTAGCATGGAGAGGACGGCATCGGCTTGGAGTGTTAAGAGGCTCGTTAATTATGTTCGGTCGTCGGGGTTGTCAACGATTTCCCGGACGATTGACGATTTCGGGACCGGTGAGTCGGAGATTTGTAGTGAATGGGAAGCTAGGAATTGTGCTCAGAGGATTTTCAAGAACGTTGCTAAACCTGGTGCCAAGTACATTGAAGAGGAGGATCTCATGAGATTTTTGAAGAGAGTAGAGATTCATACTATATTTCCACTCTTCGAAGGTGCCCTAGAAACTGGAAAGATCTCCAGGTCTTCATTTAGAAATTGGGTGATTCGAGCATATTATGAAAGGAAGGCTCTGGCACAATCACTGAATGACACAAAGACAGCAGTACAACAGCTTCACAAACTAGCAAGCTCAATAGTGATCGTGATAATAATCATAGTGTTCCTTTTGGTGATGGAGTTGGCAACTATAAAAGTTATACTTTTCGTCATCACACAAATAGTTCTTGTTGGTGTTGCCTTCCAAGGTACCTGCAAGACTGTGTTGGAGGCCATCATATTCGTCTTCATCATGCACCCATTCGACATTGGAGATCGATGTGTCATCGAGGACGTTCATATGATCGTGGAAGAGATGAATATCTTGACAACCGTGTTCCTTCGATACGACAATGAGAAAATCTACTACCCCAACGCAGTTTTGCTCAGCAAGCCAATAAGCAATTTCTATAGGAGCCCAGAGATGTGGGATTCTGTTGATTTCGTTGTTGATGTTTCAACACCTATGGAGACTATCGTTTCACTCAAGAAATCAATTCAAACGTACATAGAGAGCAAGCCGAAGTATTGGAATCCGAAGCACGCGGTGATAGCGAAAGAGATAGAGAATGTGGATAAGCTGAAGCTGTGTTTGTGCGTGCAACACACTATAAACCATCAGAACTATGGGGAGAGAAACAATAGGATCACAGAGCTTTTGATGGAGCTGAAGAAGATATTTGAGGTGCATGGAGTGAAGTATAATCTTCTTCCTCAGGAGGTCCACATTACCAAGATGAACACTTCCCAAAATGGCAGGCCTGTCTTGTAA 2139 0.4479 MENKPKPDQVVLFIDHLNASPPSSMETHHNNNDTTTTTTTIANNKSNLKKLTSKVKTLNRLNFSKPKSRIQEYNHPLLYTNFTVPEEAQDPSRYSSTDDEWDHDDDDEEDEDPEDNNNNHPKSHKKTKRRRKKIQWKRVLEWALFFIILTSQVSCMTIPSIKAKHLWGLEIWKWCLMAMVTFSGRLVSGWLVAVSVFIIERNFMLREKVLYFIYGLRKSIRNCMWLGLVLFSYWTVVFDNIQKKNHKFLNKVFQALVAVLVGAIIWLVKIVLVKMLASSFHVATYFDRMKESVFHHYILDTLSGPPLLEEYEELSQQGLTASKSMPASWKGAKDLYKSKKFGSRRLDMEKLRELSMERTASAWSVKRLVNYVRSSGLSTISRTIDDFGTGESEICSEWEARNCAQRIFKNVAKPGAKYIEEEDLMRFLKRVEIHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASSIVIVIIIIVFLLVMELATIKVILFVITQIVLVGVAFQGTCKTVLEAIIFVFIMHPFDIGDRCVIEDVHMIVEEMNILTTVFLRYDNEKIYYPNAVLLSKPISNFYRSPEMWDSVDFVVDVSTPMETIVSLKKSIQTYIESKPKYWNPKHAVIAKEIENVDKLKLCLCVQHTINHQNYGERNNRITELLMELKKIFEVHGVKYNLLPQEVHITKMNTSQNGRPVL 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1144 712 MobiDBLite consensus disorder prediction 20 46 - -
Mibi12g1144 712 FunFam Predicted mechanosensitive ion channel 543 592 - -
Mibi12g1144 712 MobiDBLite consensus disorder prediction 88 129 - -
Mibi12g1144 712 PIRSF Memb_At2g17000 9 710 IPR016688 -
Mibi12g1144 712 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 24 705 IPR016688 -
Mibi12g1144 712 SUPERFAMILY Sm-like ribonucleoproteins 534 592 IPR010920 -
Mibi12g1144 712 MobiDBLite consensus disorder prediction 100 114 - -
Mibi12g1144 712 Pfam Mechanosensitive ion channel 486 689 IPR006685 GO:0016020|GO:0055085
Mibi12g1144 712 Gene3D - 543 592 IPR023408 -
Mibi12g1144 712 Coils Coil 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1144 Mibi-ChrMibi12 26713457 26718636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1144 42 703 Mechanosensitive Ion Channel Family AT5G12080 43.732 0.0 568