Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1142 ATGGAGAGGTACAAGTTAATCAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCTGGAGAGCTATTAATAAGCTAACTGGTGAAGTTGTTGCAATTAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTATAAATCTGAGGGAGGTCAAGTCGTTGAGGAAAATGAACCACCCTAATATTGTGAGACTGAAGGAAGTTATTCGAGAATGTGACATTTTATACTTTGTTTTTGAGTACATGGAATACAACCTTTACCATCTTATGAAAGACAGGTCAAAGCTGTTTTCTGAAGGTCAAATTAGAAATTGGTGTTTTCAAATTTTCCAGAGTCTTGCTTACATGCACCAGCATGGATATTTTCACCGTGACCTGAAACCAGAAAACTTGCTGGTCACCAAGGATGTTATTAAAGTTGCTGATTTTGGTCTAGCACGAGAAATCAGTTCACAACCACCTTATACTGAATATGTCTCCACACGGTGGTATCGAGCTCCTGAAGTGTTGCTTCAGTCTTATCTCTATGGTTCTGAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAACTCTTCACTCTCCGCCCTCTTTTTCCTGGTGCAAGTGAAGCAGATGAGATCTACAAAATATGTGGTGTGATCGGCAGTCCCACCATGGAGTCATGGGCTGATGGGCTTAAACTTGCAAGGGATATCAACTATCAGTTTCCACAGCTTGCTGGTGTTCATCTTTCTGTTCTGATCCCCTCTGCAAGTGCGGATGCTATTGACCTTATGACCGCACTTTGTTCATGGGATCCCAGCAAAAGGCCAACAGCTGTTGAGGCCCTTCAACACCCATTCTTCCAGAGTTGCTTCTATATTCCTCCTTCCCTCCGAACGAAAGCAATAGCTAGAACTCCTCCATCTGCTGGGGTGCGGGGATCAGTGGATCGGCTTGAGATCAAGAGATATTCGGGCGCTCTGTCAAATTCAAAGCTAACTAATAATTATTCTTCCACAAAGCCTCAACCTACTTTTGCTGCAGGTGTGCAACGGAAACTGGATTTAACAAATGAGAAGGATGGAACTAAGTCTGAGAAAACCTTGAAGACTGTCAAACAGCCAAAATACAGGCCTCCCGGAAAGAATAGCCCAACATCAATGAACAAGGCAAGAACAACTGCACGTGGGGTTTCAGAAACAGCTGAGAAGTTGGCTAATTTGAGTGTTGGAATCCGAAGACAATCTATGGTACAAGCTCGACCTCCTCCTCCTCCGATGAAATCTGGAGTCCAATGGGGTCCTGAATCTAGAAACTTGCTGCCCAGGCATGCTCAAGAGGTTTCTACTGGGCGAGCTTTTCCTAGGAGAGTTGCCTGA 1365 0.4388 MERYKLIKEVGDGTFGSVWRAINKLTGEVVAIKKMKKKYYSWEECINLREVKSLRKMNHPNIVRLKEVIRECDILYFVFEYMEYNLYHLMKDRSKLFSEGQIRNWCFQIFQSLAYMHQHGYFHRDLKPENLLVTKDVIKVADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYGSEVDMWAMGAIMAELFTLRPLFPGASEADEIYKICGVIGSPTMESWADGLKLARDINYQFPQLAGVHLSVLIPSASADAIDLMTALCSWDPSKRPTAVEALQHPFFQSCFYIPPSLRTKAIARTPPSAGVRGSVDRLEIKRYSGALSNSKLTNNYSSTKPQPTFAAGVQRKLDLTNEKDGTKSEKTLKTVKQPKYRPPGKNSPTSMNKARTTARGVSETAEKLANLSVGIRRQSMVQARPPPPPMKSGVQWGPESRNLLPRHAQEVSTGRAFPRRVA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1142 454 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Mibi12g1142 454 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Mibi12g1142 454 CDD STKc_MAK_like 4 283 - -
Mibi12g1142 454 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Mibi12g1142 454 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1142 454 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1142 454 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1142 454 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 348 - -
Mibi12g1142 454 Gene3D Transferase(Phosphotransferase) domain 1 84 289 - -
Mibi12g1142 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Mibi12g1142 454 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Mibi12g1142 454 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Mibi12g1142 454 MobiDBLite consensus disorder prediction 375 391 - -
Mibi12g1142 454 MobiDBLite consensus disorder prediction 411 454 - -
Mibi12g1142 454 MobiDBLite consensus disorder prediction 369 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1142 Mibi-ChrMibi12 26682981 26686631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1142 1 290 Core Cell Cycle Gene Families AT3G48750 37.584 9.18e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Mibi12g1142 Pkinase 1.1e-73 CL0016