Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1119 ATGGGTGGCAGAGAAAGTTCGTTAATGCACGTTCCCATCCTCATCCTACTCATCATCGTCTCTTGTTGCAATATAGGTGAGATTATTGCAGAAGAAACCAACACACTGAATCAGTCAGACACACTCAACTCCACCCAACAACTTGTTTCCCACAACAACAACTTCACCTTAGGATTCACCAACTTCACCACTGATGACGGCAACATTAATACATACTTAGCCATTTGGAATTCCATGTATGATTCTCCTTATTTCCCTCCTTGGATCGCAAACAGAGACACCCCAATCATTAATGACCCTTCTCCTACTCTGTTCATCGACATCACCGGAAAGTTGGTCATCAATCAAACTTATGGCCACCCAATTCAACTATGCCCAGGCCAACAAACCACCACCAACAACAACAACAACGTTAACTACACCAACACAAAGGCCGTCTTGAAGGACAATGGGAACCTCGTACTCACACAAGTGAATTCCGATGGATCTGAGGGAAGAATCTTGTGGCAGAGCTTTGATTGTCCCACTGACACTCTGTTGCCTGGCATGAAACTTGGGGTCAATCACAGAACAGGAAGGAATTGGACTCTAACATCATGGTTGGCAAATGATGATCCATCTCCAGGACCTTTCACACTAGAATGGGACCCACATGGATTAGAGTTAGTTCTTAAACGTAGAGGGGCTATTTTCTGGACAAGTGGGGCGGCGTTGAAAAATGTCAGTTTTGAAGGTGATCTTAATGGTGGAATGACCTTTCGGTACATAGGAACAGCCTTGGATGATGCACAATCTTATAATATGACTTATGCTAGTGCTTCAGATGAAGAGTTCTTCAGCTATACTTTGTCACATGATCTTGTGTTTCTTGGTAGCCAAGATTGGAAAATAAACTATGACGGTCAATTTGGGTCAACGCCATTACAGGAGCATTGTTATGGGTACAAGACAAATGAGGATGTGGGATGTGCAGAATGGGGACAAAATCATTGTAGGATTTACAATACAACGTTTCGGTTGTTGTCTGGGAACTTTGTGAATAAAAGTGATGGGAGCCTTTTTGAAGGTGATAGTAAAAGGATTGGGCCAGATGATTGTAGAGTTAGTTGCTGGAATGATTGTAATTGTCAGGGTTATCGGAGGACGAGCACTTTAGATTGTGTTCAATATCACCAAGATGCAGTTTTCCAACCCGATCCATCTGGGGATTCGCCTCAATTTTATGTTATCCAACCGCCACAAAAGGGTGAGGGTGCCAATGTTATCCAACGGCCACAAAAAGTTGCAGGAAGGAACACCAAGAAGGAATGGATTAATATTGCAATTTCAGTTCCGATAAGCGTGCCGTTAGTTTCTGTCATTGTCATTGTCATTGTCTTCTGTTGGAGATGGAGAAGAACAGGGACCAAAGAAGAAAAGCATATACTTCAACTGATGACAACAAATGATACTGTGTATAACGCGAATGAGCTTGAATATGACAATGATTTTGCTCAAAATTTGAAAATCTTCAGCTTTGTGTCTATCATTGAAGCTACAAATAACTTCTCTCCACAAAACAAGCTTGGACAAGGAGGTTTTGGTCCGGTTTATAAGGGAAAACTACCAGAAGGGAAAGAAATTGCAGTGAAAAGGCTATCACGAAATTCAGGACAAGGATTAGTGGAGTTTAAAACCGAGCTAATACTCATAGCAAAACTACAACACATGAATCTAGTTTGCCTGCTTGGGTGTTGCATACACAATGAAGAGAAGCTGCTAATTTACGAATACATGCCTAACAGAAGTTTGGACTCCTTTCTCTTTGATGAAATGAAGAGAGGTGTATTAAACTGGAGAATGAGAGTAATGATTATAGAAGGAATTTCACAAGGACTTCTTTACCTCCATCAGCATTCGAGGTTAAGAATCATACACAGAGATATGAAAGTTAGTAATATATTACTCGATAAAGACATGACTCCTAAAATTTCTGACTTTGGAATGGCAAGAATTTTTAAGCGGAATGAGCTCATGGCCAACACTAGCAATCCTGTTGGGACATATGGATATATGTCTCCTGAGTATGCAATGGACGGAATATTCTCCATAAAATCAGATATTTTCAGTTTTGGAGTTATAATTCTTGAAATTTTAAGTGGCAAGAGGAATAATGGCTTTTATCATGTTAAGAAGCCTCTAAATCTAATAGGACATGCTTGGGATTTGTGGGGAAAAGGGGCTGGTTTGGAGTTAATGGATCCAACACTAAGTGATTTATGTTCAAATGCCCAATTTCTTAGATTTATTCAAATTGGCCTTTTGTGTGTGGAAGAATCTCCGTTAAATAGACCAACCATTTCGGAAGTTATCTTCATGATCACAAATGAAAGTTCCACCTTACCCATAGTGAAGAAACCTGCTTTTACAGATTTAGACATCCATACAAATCCTCAAAGAGATCATGACTTGGAGAACAATTCCATCAACATTATGTCGATATCTACTTTAAACGGAAGATAG 2502 0.4005 MGGRESSLMHVPILILLIIVSCCNIGEIIAEETNTLNQSDTLNSTQQLVSHNNNFTLGFTNFTTDDGNINTYLAIWNSMYDSPYFPPWIANRDTPIINDPSPTLFIDITGKLVINQTYGHPIQLCPGQQTTTNNNNNVNYTNTKAVLKDNGNLVLTQVNSDGSEGRILWQSFDCPTDTLLPGMKLGVNHRTGRNWTLTSWLANDDPSPGPFTLEWDPHGLELVLKRRGAIFWTSGAALKNVSFEGDLNGGMTFRYIGTALDDAQSYNMTYASASDEEFFSYTLSHDLVFLGSQDWKINYDGQFGSTPLQEHCYGYKTNEDVGCAEWGQNHCRIYNTTFRLLSGNFVNKSDGSLFEGDSKRIGPDDCRVSCWNDCNCQGYRRTSTLDCVQYHQDAVFQPDPSGDSPQFYVIQPPQKGEGANVIQRPQKVAGRNTKKEWINIAISVPISVPLVSVIVIVIVFCWRWRRTGTKEEKHILQLMTTNDTVYNANELEYDNDFAQNLKIFSFVSIIEATNNFSPQNKLGQGGFGPVYKGKLPEGKEIAVKRLSRNSGQGLVEFKTELILIAKLQHMNLVCLLGCCIHNEEKLLIYEYMPNRSLDSFLFDEMKRGVLNWRMRVMIIEGISQGLLYLHQHSRLRIIHRDMKVSNILLDKDMTPKISDFGMARIFKRNELMANTSNPVGTYGYMSPEYAMDGIFSIKSDIFSFGVIILEILSGKRNNGFYHVKKPLNLIGHAWDLWGKGAGLELMDPTLSDLCSNAQFLRFIQIGLLCVEESPLNRPTISEVIFMITNESSTLPIVKKPAFTDLDIHTNPQRDHDLENNSINIMSISTLNGR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1119 833 Pfam Protein tyrosine and serine/threonine kinase 519 716 IPR001245 GO:0004672|GO:0006468
Mibi12g1119 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 481 591 - -
Mibi12g1119 833 Gene3D - 27 173 IPR036426 -
Mibi12g1119 833 SUPERFAMILY Protein kinase-like (PK-like) 497 808 IPR011009 -
Mibi12g1119 833 ProSiteProfiles Bulb-type lectin domain profile. 33 168 IPR001480 -
Mibi12g1119 833 PIRSF SRK 5 833 IPR024171 GO:0004674
Mibi12g1119 833 Gene3D Transferase(Phosphotransferase) domain 1 592 798 - -
Mibi12g1119 833 Gene3D Phosphorylase Kinase; domain 1 491 591 - -
Mibi12g1119 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Mibi12g1119 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 795 - -
Mibi12g1119 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 206 IPR036426 -
Mibi12g1119 833 SMART serkin_6 516 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1119 833 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 142 810 - -
Mibi12g1119 833 Pfam D-mannose binding lectin 88 200 IPR001480 -
Mibi12g1119 833 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Mibi12g1119 833 ProSiteProfiles Protein kinase domain profile. 516 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1119 833 CDD STKc_IRAK 522 789 - -
Mibi12g1119 833 SMART blect_4 33 175 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1119 Mibi-ChrMibi12 26423816 26427690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1119 435 802 Receptor kinase-like Gene Family AT4G23230 47.696 3.54e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi12g1119 PK_Tyr_Ser-Thr 3.3e-43 CL0016