Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1118 ATGACGACGACTGCAAGCAATCTCTTGCACTGCAATGAGCCGAAATTCGCAATGCGTCGTACTTGGTATTCGCCGGAAACTGGAATTTACACTAGCATTCACGCGCCGGTGGAGCTACCTTCAGACTCATTTCTTGATCTTGTCTCTCACATTTTTTCTTACCAACACAATGGGGTTTCAGCTCTCATTGATTCTTCATCTGGGTGTTCAATTTCTTACTCGGAATTGTTCCCTTTGGTCAAATCCATGGCATTTGGTCTCCATAAAATGGGCGTTTCGCAAGGTGACGTTGTTCTTCTTCTAATTCCTAATTCCATTTACTATCCCATTGTTTTCTTGGGTGTTTTGTATCTTGGCGCTATTGTCACTCCGTTGAATCCTCGAAGTCATGTCTCAGAAATCCATAAGCAAATTGCGGAATGTGGTGTGAGTTTGGCTTTTACTTCACATGAAAAAGTTGGAAAGCTTCAACCTTTGGGCATTCCAGTTATTGTAGTTCCAGAAAATGTCAATGACTTGAATTGCTCTGATTTCTCAGTTTTTTATAGCCTTGTTTCTGGTAAAGCGTGTGTGTTTTCGAGGCCGGTTATTAAACAAGAAGACAAGGCGGCTATATTGTATTCTTCTGGGACCACGGGTGCGAGTAAAGGAGTTGTTATAACTCATAAGAATTTTATTTCTATGGTTGAGCTTTTCGTGAGGTTTGAAGCTTCTCAATATGAATATTCAAGCTCAAAGAATGTGTTCCTTGCTGTTCTGCCAATGTTCCATATATATGGTTTATCACTTTTTGCAGCAGGATTACTGTCTTTAGGATCTACGGTTGTTGTAATGAGAACATTTAACATCAATGAAGTGGTTAAGGTGATTGATAATTACAAAGTCACACACTTCCCTGTTGTTCCTCCAATATTGACGGCATTGACCAAAAGTGTAACTGGTATAAATAGGAGTTATCTGCAGAGTTTGGTACAGGTCTCTTGTGGGGCAGCGCCTTTGAGCATGAAAAATATAGAGGACTTCATTCACACTCTACCTAACGTTGACTTTATACAGGGTTATGGAATGACTGAATCGACCGCAGTAGGAACACGTGGCTTCAATACTGAAAAGTTTCGAAAATATTCTTCTATAGGGTTGTTAGCTCCCAACATGGAAGCAAAAGTGGTTGATTGGAAAACTGGTGCTTTTTTGCCTCCAAGAAGTAGTGGTGAGCTTTGGTTAAGGGGGCCTTCAAACATGAGAGGATACTTGAATAATGAGGAAGCGACAATGTCAACAATTGATAAAGATGGTTGGCTGCACACTGGTGATGTTGTTTGGTTTGATGAAGATGGATATTTACATTTGTCTGACCGCTTGAAAGATATTATCAAATACAAGGGCTATCAGATATCTCCAGCTGATTTAGAAGCTATATTAATTTTGCATCCCGAGGTAGTTGATGCAGCAGTTACAGGTGTCAATGATGAAGAAGCCGGGGAGATACCAGTGGCATTCGTGGTCAGGAAGGTTGGAAGCAGCCTCTCCCAGAAAGCTATTCTGGATTATGTTTCTCAGCAGGTTGCTCCATATAAGAAGGTGAGGAAAGTGGTGTTCATTGACTCAGTACCAAGGTCAGCTGCTGGGAAGATTCTGAAGAGGCAACTGAAGAGGAATTGCTTAGCTTCTAAACTCTAA 1680 0.4107 MTTTASNLLHCNEPKFAMRRTWYSPETGIYTSIHAPVELPSDSFLDLVSHIFSYQHNGVSALIDSSSGCSISYSELFPLVKSMAFGLHKMGVSQGDVVLLLIPNSIYYPIVFLGVLYLGAIVTPLNPRSHVSEIHKQIAECGVSLAFTSHEKVGKLQPLGIPVIVVPENVNDLNCSDFSVFYSLVSGKACVFSRPVIKQEDKAAILYSSGTTGASKGVVITHKNFISMVELFVRFEASQYEYSSSKNVFLAVLPMFHIYGLSLFAAGLLSLGSTVVVMRTFNINEVVKVIDNYKVTHFPVVPPILTALTKSVTGINRSYLQSLVQVSCGAAPLSMKNIEDFIHTLPNVDFIQGYGMTESTAVGTRGFNTEKFRKYSSIGLLAPNMEAKVVDWKTGAFLPPRSSGELWLRGPSNMRGYLNNEEATMSTIDKDGWLHTGDVVWFDEDGYLHLSDRLKDIIKYKGYQISPADLEAILILHPEVVDAAVTGVNDEEAGEIPVAFVVRKVGSSLSQKAILDYVSQQVAPYKKVRKVVFIDSVPRSAAGKILKRQLKRNCLASKL 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1118 559 Gene3D - 29 455 IPR042099 -
Mibi12g1118 559 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 24 552 - -
Mibi12g1118 559 ProSitePatterns Putative AMP-binding domain signature. 205 216 IPR020845 -
Mibi12g1118 559 Gene3D - 456 555 IPR045851 -
Mibi12g1118 559 FunFam 4-coumarate--CoA ligase 2 456 557 - -
Mibi12g1118 559 Pfam AMP-binding enzyme C-terminal domain 470 544 IPR025110 -
Mibi12g1118 559 CDD 4CL 39 550 - -
Mibi12g1118 559 SUPERFAMILY Acetyl-CoA synthetase-like 50 552 - -
Mibi12g1118 559 FunFam Long-chain-fatty-acid--CoA ligase FadD 30 455 - -
Mibi12g1118 559 Pfam AMP-binding enzyme 56 460 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1118 Mibi-ChrMibi12 26408014 26411682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1118 22 559 Monolignol Biosynthesis Gene Families AT4G19010 59.669 0.0 665