Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1115 ATGTTCCGTTATTGCAGGCATCCATTCTTTGTTATCCCTTACTCCCATACTAATCCTCAAAACAAAAACCAACTTAAACTCAATCCCTCTCTCTCATTCCTCTCAAATTCTTCCTCCCCCCAAAGAGAGACACAAAGAGAGAGGGAGAGAGAGAGAGAAATGGCAACTTTCACAGTGTACACAACACAATCTCTCAACACAAATTCCTCCTTCACAACCCCATCAAAATCCCACTTGGGTTTCCACCAAAAACAGGTTCTTTTCTACAGAAGCAGAACCACCAGCAGAAGCAATAACAGCAGCAACAAACCATGGTTGATAACATGCGCTGCAGGCGACTCACAGACAGTGGTGATTGGTCTAGCAGCAGACTCAGGATGTGGGAAGAGTACCTTCATGAGGAGACTAACAAGTGTGTTTGGAGGCACAGCAGAACCACCAAAGGGAGGGAATCCAGATTCCAACACACTCATAAGTGACACAACCACAGTTATATGTTTGGATGATTATCACTCACTTGACAGAACAGGAAGGAAGGAAAAGGGAGTCACAGCACTTGACCCAAGAGCCAACGACTTTGATCTCATGTATGAGCAAGTTAAGGCCATGAAGGAAGGAATTGCTGTTGAGAAACCAATTTACAACCATGTCACAGGTCTCTTGGACCCACCAGAACTCATCAAGCCACCCAAGATTTTGGTCATAGAAGGCTTGCACCCAATGTTCGATGCTCGAGTCAGAGAACTATTGGACTTCAGCATTTACTTGGACATTAGCAATGAAGTGAAATTCGCCTGGAAAATTCAGAGAGACATGGCAGAACGTGGACATAGTCTCGAAAGCATCAAAGCTAGTATCGAAGCAAGAAAACCGGATTTCGAAGCTTATATTGATCCTCAGAAGCAATATGCAGATGCAGTGATAGAAGTGTTACCAACACAATTAATACCAGACGATAATGAAGGGAAGATATTGAGAGTGAGATTGATACAGAAAGAAGGGGTTAAGCATTTTAGCCCTGTTTACTTGTTTGATGAAGGCTCTACCATTTCATGGATTCCTTGTGGAAGGAAGCTCACTTGCTCTTACCCTGGCATCAAATTCTTCTATGGTCCTGAAACTTACTATGGACATGAGGTATCAGTTGTGGAGATGGATGGGCAATTTGACAGACTAGATGAACTAATATACGTTGAAAGCCATCTAAGCAATCTGTCAACCAAGTTCTATGGAGAAGTTACACAACAAATGTTGAAGCACGCCGAATTCCCCGGCAGCAACAACGGCACAGGTCTCTTCCAAACCATAGTTGGCTTGAAGATCAGAGATCTGTTTGAGCAGCTTGTAGCAAGCAAGGCTCAGACACCAGTAAAATCAGCTAAAGCTTGA 1389 0.4348 MFRYCRHPFFVIPYSHTNPQNKNQLKLNPSLSFLSNSSSPQRETQREREREREMATFTVYTTQSLNTNSSFTTPSKSHLGFHQKQVLFYRSRTTSRSNNSSNKPWLITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGTAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAMKEGIAVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDARVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKHFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPETYYGHEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHAEFPGSNNGTGLFQTIVGLKIRDLFEQLVASKAQTPVKSAKA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1115 462 PANTHER URIDINE KINASE 98 348 - -
Mibi12g1115 462 MobiDBLite consensus disorder prediction 30 51 - -
Mibi12g1115 462 FunFam Phosphoribulokinase 113 343 - -
Mibi12g1115 462 Pfam Phosphoribulokinase / Uridine kinase family 118 316 IPR006083 GO:0005524|GO:0016301
Mibi12g1115 462 Gene3D - 113 346 IPR027417 -
Mibi12g1115 462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 387 IPR027417 -
Mibi12g1115 462 PRINTS Phosphoribulokinase family signature 267 284 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mibi12g1115 462 PRINTS Phosphoribulokinase family signature 123 140 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mibi12g1115 462 PRINTS Phosphoribulokinase family signature 232 250 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mibi12g1115 462 PRINTS Phosphoribulokinase family signature 285 308 IPR006082 GO:0005524|GO:0005975|GO:0008974
Mibi12g1115 462 CDD PRK 118 407 - -
Mibi12g1115 462 ProSitePatterns Phosphoribulokinase signature. 267 280 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1115 Mibi-ChrMibi12 26394384 26398523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1115 75 308 PRT Gene Family AT1G55810 25.726 1.19e-15 77.0