Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1113 ATGGCAGAAAGTCCGGTATTGTTCTTACTGGACAAGCTAACATCTTTACTGCAAGAAGAAGTTCAGCTTTTGAAGGGTGTTCGAACAGAGATTCAGTTCATTAAAGATGAATTGGAACGCCTAAAGGCAATATTAAGAATGGCTGATGCTTTGGAGGACAAAGACCCAGAACTCAAAGTTTGGGTGAAGCAAGTCAGAGATGTGGCTCATGACATGGAAGACGCCATTGATGAGTTCACTATTCGCCTTGTTGATCATCGTGGCCATGGTCACAATCATAATTCTGCTCTCAGAAAGCTCTTTTTAGCCATTAAAAGTCTCAAAGCTCAACATCGGATTGCTTCCGATGTACAAGAGATCAAAGGCAGGGTGGAAAACATCTCCAAAGTTTGTCGCACCATAACTGATACTGGGTCAAGCTCGAATAATTTCTATACACCGAGGATTGATAGTCAAGGGGATGCACTTCTGCTTGAGGAAGCTGATCTTGTGGGGATTGAGAAGCCAAAGAAGCAGCTAATTGATTTGCTTTTCCAGGAGGAACAGGGAAAGGTGGTGATTCCAATCTATGGAATGGGAGGATTGGGGAAAACCACAGTGGCAAAGCAAGTCTATGATGATCCAATAGTGAAGAAGCGTTTCAAGATGCACGCTTGGGTCACAGTTTCTCAATCATTCAACCTCAAGGAGCTTCTAAGAGACCTGGTTCAACAGCTTTACAAAGTCATTGGAAAACCAGCTCCTGCAGAAATTGGCACCATGAAAATTGACAGTCTCAAGGAAGTGGTCAAGACTCTGCTTCAACAAAGCAGATATCTCATTGTCCTAGATGATATATGGCGTGTAAATTCTTGGGATTCTATCAAACTTGCTTTGCCTAATAACAACTTTGGCAGTAGAATAATGGTGACCACAAGAAACAAAGAAGTGGCACTTTCCTGCTGCACTGAGTTGCAAGGTAAGATCTATAACCTGGAATTCTTACCTCAGAATGAAGCATGGTCTCTTTTCTGTAAGAAAACATTTCAAGGGAATTCTTCTTGTCCTCCTCATTTGGAGGAGACTTGTAAGAGTATATTGAAAAGATGTGGAGGATTGCCTCTGGCAATTGTGGCAATTAGTGGTGCTTTGGCTACAAAAGACAGGACCAACATAGAAGAATGGTCAGTTTTTAGCAAGAGTAGTGCATCTGAGATTGAAAGCAATGACAAGATGGAGGATATGAACAAAGTTCTTTCACTAAGTTTCAATGACTTGCCTTACTATCTTAAATCCTGCTTGTTGTACCTGATCATCTTCCCGGAGTTTCACTCCATCGAGCATATGAGGCTGATTCGCTTGTGGATAGCTGAAGGGTTTGTCAATGGAGAAGAAGGAAGGACACTTGAAGAAGTTGCAGAGAGTTACCTGAAGGAGCTCTTGAACAGGAGTCTGATTCAGGTGGTGGAGAAAGGAACTGATGGCAGGATGAAGACTTGTCGTGTTCATGACTTTCTTCGGGACATTATCAATTTGAAGTCAAAAGATCAGAACTTTGCAACAATAGCTAGAGACCAGGAAATAGTCTGGCCGGAAAGAGTTCGTCGCTTGTCAGTAATGAATAGTTTACAGAACATACAGCAAAATAGGACATCATTCCGATTGCGTTCTCTGCTATTGTTTCCTTTAGCAGATCCACATGATCATATCTCCATATCTGCATTAATCCCACATGGTTGTAGGCTGCTCAGGGTGCTAGATCTGCAAGATGCACCTTTGGAATTGTTTCCTACCGAAATTGTCAACCTTTACCACCTGAGGTATCTAAGCCTGAAGAACACCAAGGTGAAAAGCATTCCATGCTCCATTAAGAAGCTGCAAAACCTGGAGACATTAGATCTCAAACACTCCCATGTCACTGAATTGCCGGTCGAAATCTTGGAGCTGCATCGACTTCGCCATCTACTGGTGTATTATTATGAGATTGAATCCTATGCTCATTTCCACTCAAGACATGGTTTCAAGCTTCCTGGTCCAATAGGATGCATGCAATCTCTGCAAAAGCTTTGTTTCATAGAGGTAGACCAAGGAAGTCAGGAATTAATGGTTGAGCTAGGAAAGCTGACTCAACTCAGAAGGCTGGGAATAAGAAAGCTGAGGAAAGAAGATGGACCTGCTTTGTGCATATCCATTCAGAAAATGACCAATCTCAGGTCTTTGTCCATAACTGCAATAGAAGAAGACGAGATTATTGACATCCAAAACATTTCCAAGCCTCCTCCATACCTAAGGCAATTGTACTTATGTGGACGTTTAGAGAAGTTACCCGAATGGATACCATCTCTTCACAATCTAGTCAGAGTGTATTTGAAATGGAGCAGGTTGAAGGAGGATCCTCTGGTGTATCTTCAAGATTTGCCAAATCTAATGCATCTAGAGCTTTTAAAGGTTTATGTTGGTGAGACACTGCATTTCATGGGAGATAAATTTCGAAGTCTGAAGCTTTTAGGCCTTGATTATTTGGATGGATTGAAATCCATAATAGTGGAGGAAGGATCAATGCCTAATTTAAAAAGATTGATCATCCAGAGATGTGGATTGTTGAAGCAAGTACCCTCAGGTATAGAACATTTGAGTAAGCTAAAAGCAATTGACTTCTTTGATATGCCTGATGAATTGATCAATGCTTTGAGTCCAAATGGAGGTAAAGATCGTCAGAGAGTAGAACATGTTCCTGCGGTTTATTCAACCTACTGGAAATCTGGTACATGGGAAGTCTACTCATTGGATACTTTTGGAGAGAGAGACAGTTCTTCAAGTAGTAATGCCGCGATGAAAAGTCACGAGCTTCCTACACTTTGGAAGGTTTAA 2850 0.4158 MAESPVLFLLDKLTSLLQEEVQLLKGVRTEIQFIKDELERLKAILRMADALEDKDPELKVWVKQVRDVAHDMEDAIDEFTIRLVDHRGHGHNHNSALRKLFLAIKSLKAQHRIASDVQEIKGRVENISKVCRTITDTGSSSNNFYTPRIDSQGDALLLEEADLVGIEKPKKQLIDLLFQEEQGKVVIPIYGMGGLGKTTVAKQVYDDPIVKKRFKMHAWVTVSQSFNLKELLRDLVQQLYKVIGKPAPAEIGTMKIDSLKEVVKTLLQQSRYLIVLDDIWRVNSWDSIKLALPNNNFGSRIMVTTRNKEVALSCCTELQGKIYNLEFLPQNEAWSLFCKKTFQGNSSCPPHLEETCKSILKRCGGLPLAIVAISGALATKDRTNIEEWSVFSKSSASEIESNDKMEDMNKVLSLSFNDLPYYLKSCLLYLIIFPEFHSIEHMRLIRLWIAEGFVNGEEGRTLEEVAESYLKELLNRSLIQVVEKGTDGRMKTCRVHDFLRDIINLKSKDQNFATIARDQEIVWPERVRRLSVMNSLQNIQQNRTSFRLRSLLLFPLADPHDHISISALIPHGCRLLRVLDLQDAPLELFPTEIVNLYHLRYLSLKNTKVKSIPCSIKKLQNLETLDLKHSHVTELPVEILELHRLRHLLVYYYEIESYAHFHSRHGFKLPGPIGCMQSLQKLCFIEVDQGSQELMVELGKLTQLRRLGIRKLRKEDGPALCISIQKMTNLRSLSITAIEEDEIIDIQNISKPPPYLRQLYLCGRLEKLPEWIPSLHNLVRVYLKWSRLKEDPLVYLQDLPNLMHLELLKVYVGETLHFMGDKFRSLKLLGLDYLDGLKSIIVEEGSMPNLKRLIIQRCGLLKQVPSGIEHLSKLKAIDFFDMPDELINALSPNGGKDRQRVEHVPAVYSTYWKSGTWEVYSLDTFGERDSSSSSNAAMKSHELPTLWKV 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1113 949 CDD RX-CC_like 2 129 IPR038005 -
Mibi12g1113 949 PRINTS Disease resistance protein signature 363 377 - -
Mibi12g1113 949 PRINTS Disease resistance protein signature 186 201 - -
Mibi12g1113 949 PRINTS Disease resistance protein signature 266 280 - -
Mibi12g1113 949 PRINTS Disease resistance protein signature 617 633 - -
Mibi12g1113 949 SUPERFAMILY L domain-like 495 884 - -
Mibi12g1113 949 Gene3D - 6 114 - -
Mibi12g1113 949 PANTHER DISEASE RESISTANCE PROTEIN RP 31 862 IPR044974 GO:0006952
Mibi12g1113 949 Pfam NB-ARC domain 167 417 IPR002182 GO:0043531
Mibi12g1113 949 Gene3D - 153 319 IPR027417 -
Mibi12g1113 949 FunFam Probable disease resistance protein At1g61300 154 317 - -
Mibi12g1113 949 Pfam Rx N-terminal domain 7 91 IPR041118 -
Mibi12g1113 949 Gene3D - 328 415 IPR042197 -
Mibi12g1113 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 430 IPR027417 -
Mibi12g1113 949 Coils Coil 24 54 - -
Mibi12g1113 949 FunFam Probable disease resistance protein At1g63360 416 505 - -
Mibi12g1113 949 Gene3D Ribonuclease Inhibitor 561 897 IPR032675 -
Mibi12g1113 949 Gene3D - 416 506 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1113 Mibi-ChrMibi12 26360789 26364155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1113 187 631 WRKY Transcription Factor Family AT5G45050 23.176 1.77e-06 50.1