Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1112 ATGGCAGAGAGAGCAGTGAATTATCTTCTCCAAAAGCTTGAGCCTTTTTTAGAAGACAAGCTGAATTTGTTCAGTTGGGTTGGAAAAAATGGTAAGGAGCATCAGAAAGATAGGTTGGAGCTTATCAGAGCCTTATTAAGGGATCCAGATGAATTAGAAGATAGTGATGAGGAACTCAAGATTTGGATTCGGCAAGTGAGAGATGTTGTTCATGAGACTGAAGATCTTCTGGACGAATTAGAGCTACTTCAGACTCATAACCACTCAGATGGATTCTCTGCTTCACTTGGGAAGATTTCTTGCTGTATCAGAAACATGAAAGCTCGATATCGAATTGCTTCTGAATTGAAAGACATGGATTGCAAAATGACAAATATTTTGTCAGAGCACCAGAGATTCCTCAGTAGATATGAAGCTGCTGCTCATGCTTCAAATTCCATTTCTGCAGGTAACACATGGCATGACCAGCGAGGGGATGCTCTTCTCCTGGACAATAATGACCTAGTGGGCATAGACAGATGTAAAAGTAAGTTCATCAAGTGGTTGGTTAAAGGTTGTTGCAGCCGCAGAGTAATTTCCGTAACAGGAATGGGCGGACTGGGGAAGACAACCCTGGTGAAGAAAGTATATGATGACCCAGAAGTAAAAAGACATTTCAAAACCTGTTTCTGGATTACTGTTTCTCAATCTTCTAGCACAGAGGAACTTCTCAAAGACACAGTTGAAAAACTTTTTTATGAAATAAGACAGCCAATTCCAGAAGGCCTAGAAAGCATGAGCAGCGTTCGATTGAAAGCAATAATCAAGAAGTTTCTGCAGAGAAGGAGGTACTTGGTGGTGTTTGATGATATGTGGCACATGTATGAATGGGAAGCTCTCAAATTTGCATTGCCTAGTAACAACTGTGGCAGCAGAGTCATGATCACCACAAGAAAAACTGATTTGGCCTATTTCTCCATCATTGAATCCAACAAAGGTAAGGTGTATAATATGCAATGCTTGCTAGAAGATGAAGCTTGGGACCTATTTTGCAGAAAAACCTTTCCTGATCATTCTTGCCCCTCATATTTGATGATCATATGCAAGAGTATCTTGAGAAAATGTGAGGGTCTTCCCCTTGCAATTGTGGCAATCAGTGGCATTTTGGCAACAAAAGATCGGCGGGCCATAGATGAGTGGGACATGATTTACCGCAGCCTTGGAGCTGAAATTCGAGGCAATGACAAGCTTGATAATTTGAAGAAAGTTCTTGGCCTCAGCTTCAGTGATCTGCCTTACCATTTGAAGCAATGTATCTTGTACTTGAGCATATTTCCCGAGGCCTATCTGATTAAGCGGATGAGATTGATTCGGTTATGGATAGCTGAAGGATTTATTGAAGCCAAAGAAGGAAGAACACTTGAAGATGTTGCAGAGGATTATCTCAGAGAGCTACTGAACAGAAATTTGATACAACTAGCAAAGACAACATCAGATGGAAGAGTCAAAACTCTCAGAATCCATGCCCTTCTGAGAGAAATCCTCATTTTGAAATCCAAAGATCAAAACTTTGCTGCCATTGTCAAAGAGAAAAGTGCGCCATGGCCAGAAAAGACTCGACGCCTTTCAGTGTATAGTACATTGCCTAAAGGACAGCACCAAAGGTCTGTTTCCCAACTTCGTTCCCTTTTCATGTTTGGAGTTGCAGAGAGATTATCCCTCCACAAATTGTTCCCAGGTGGTTTTAGACTGCTTAATGTATTAGATTTTGAAAAAGCACCTTTGAAGAAGTTTCCAGTACAAATCACTAATCTATATAATTTGAAGTACCTGAGTTTAAGAAAAACAAAGGTGAAAATCATTCCAAGTTATATAGGGAAGTTACAGAACCTAGAAACACTGGATGTCAAATACAGTTCTGTCACTGAATTGCCCGCAGATATAACAAAGCTTCACAAACTTCGTCATCTCCTGTTATATGGTTTTCGCTCGAAAGCAAGGAGCTATGCAAAGTTCCATGCCAAACGTGGTTTTAAGGCCTTCCATGAAATAGGAAATCTAGTATCACTACAGAAACTTGGTTTCATAGAGGTAGATCAATGCGGTAGCACTGTAATAAAGCAGTTAGAAGGGCTAACTCAACTAAGAAGGCTTGGAATCATGAAGTTGAGAGAGGAGGATGGTAAGGCTTTCTGTTCATCCATTGAGAAGTTAAATAATCTACGTGCACTCTCAGTTACCTCAGAGGGTGAGAATAAGTCCATTGATCTAAGGTTCCTGTCTTCACCTCATCCATTTCTTCAACGCTTGTATTTGTCAGGACACCTTCATGAGCTACCACAATGGATATCTTCACTTCACAGCCTGGTCAAGCTATTTCTGAAATGGAGCAATTTGAAACATGATCCTTTGGTATATCTTCAGGATTTACCCAACCTTGCTCATCTTGAACTACTCCAGGTTTATGATGGTGGTACTTTGTGTTTCAAATCTGGAAAATTTGAGAAGCTTAAGGTTTTAGGTCTGGACAAGTTTGATGAACTCAGATTGGTGCATGTGGAGGATGGTGCAATGCCTTGCCTGGAAAAGCTTATCATCCAGAGATGTAAACTGCTAAAGAATGTGGCATTAGGCATACAACACTTGACTAAGTTGAAAGTGCTCGAGTTTTTTGATATGCCTGATGAACTGATCATGTCATTATATCCAGATGGTAGAGGGGAAGATTACTGGAAAGTTGCACACATACCTGAAGTCTATTTTACCTACTGGAGAGAAGGTGCTTGGGATGTTTATGCACTAGAGAGCTTCAAAGAGAGTTCTCCTAGTTCAGGTACTGTCATGAGAAGCCATGAAAATCGCAATCTATGGAAATTGTCAAAATCTTGGAGCTGCACCGACTTCACCATCTACTGGTGTATTATTATGATTGAATCCTATGCTCATTTCCACTCAAGACATGGTTTCAAGCTTCCTGGTCCAATAGGATGCATGCAATCTCTGCAAAAGCTTTGTTTCATACAGCAAGTACCCTCAGGTATAGAACATTTGAGTAAGCTAAAAGCAATTGACTTCTTTGATATGCCTGATGAATTGATCAATGCTTTGAGTCCAAATGGAGTCGGCGGCGACGTCTTGACTCCGTCGAGTGGCGGTGGCTCCGATGGTGCGCTCGCCCAGCCGCGGAAGATGAATAGGGCGGCTGCCCTCCTTGCTCACACGTGTTTCTGCCCTTTTCTTCTTTTACTATCCAACTTGCAGATTGCAATTCATTCATCCTCAAAAGTGGCTACTGGTCAAAGAAAATAA 3288 0.4118 MAERAVNYLLQKLEPFLEDKLNLFSWVGKNGKEHQKDRLELIRALLRDPDELEDSDEELKIWIRQVRDVVHETEDLLDELELLQTHNHSDGFSASLGKISCCIRNMKARYRIASELKDMDCKMTNILSEHQRFLSRYEAAAHASNSISAGNTWHDQRGDALLLDNNDLVGIDRCKSKFIKWLVKGCCSRRVISVTGMGGLGKTTLVKKVYDDPEVKRHFKTCFWITVSQSSSTEELLKDTVEKLFYEIRQPIPEGLESMSSVRLKAIIKKFLQRRRYLVVFDDMWHMYEWEALKFALPSNNCGSRVMITTRKTDLAYFSIIESNKGKVYNMQCLLEDEAWDLFCRKTFPDHSCPSYLMIICKSILRKCEGLPLAIVAISGILATKDRRAIDEWDMIYRSLGAEIRGNDKLDNLKKVLGLSFSDLPYHLKQCILYLSIFPEAYLIKRMRLIRLWIAEGFIEAKEGRTLEDVAEDYLRELLNRNLIQLAKTTSDGRVKTLRIHALLREILILKSKDQNFAAIVKEKSAPWPEKTRRLSVYSTLPKGQHQRSVSQLRSLFMFGVAERLSLHKLFPGGFRLLNVLDFEKAPLKKFPVQITNLYNLKYLSLRKTKVKIIPSYIGKLQNLETLDVKYSSVTELPADITKLHKLRHLLLYGFRSKARSYAKFHAKRGFKAFHEIGNLVSLQKLGFIEVDQCGSTVIKQLEGLTQLRRLGIMKLREEDGKAFCSSIEKLNNLRALSVTSEGENKSIDLRFLSSPHPFLQRLYLSGHLHELPQWISSLHSLVKLFLKWSNLKHDPLVYLQDLPNLAHLELLQVYDGGTLCFKSGKFEKLKVLGLDKFDELRLVHVEDGAMPCLEKLIIQRCKLLKNVALGIQHLTKLKVLEFFDMPDELIMSLYPDGRGEDYWKVAHIPEVYFTYWREGAWDVYALESFKESSPSSGTVMRSHENRNLWKLSKSWSCTDFTIYWCIIMIESYAHFHSRHGFKLPGPIGCMQSLQKLCFIQQVPSGIEHLSKLKAIDFFDMPDELINALSPNGVGGDVLTPSSGGGSDGALAQPRKMNRAAALLAHTCFCPFLLLLSNLQIAIHSSSKVATGQRK 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1112 1095 FunFam Probable disease resistance protein At1g63360 421 510 - -
Mibi12g1112 1095 Pfam NB-ARC domain 175 422 IPR002182 GO:0043531
Mibi12g1112 1095 Gene3D Ribonuclease Inhibitor 544 893 IPR032675 -
Mibi12g1112 1095 Gene3D - 4 113 - -
Mibi12g1112 1095 CDD RX-CC_like 2 126 IPR038005 -
Mibi12g1112 1095 Gene3D - 162 321 IPR027417 -
Mibi12g1112 1095 Coils Coil 63 83 - -
Mibi12g1112 1095 FunFam Probable disease resistance protein At1g61300 159 323 - -
Mibi12g1112 1095 Gene3D - 421 511 IPR036388 -
Mibi12g1112 1095 PRINTS Disease resistance protein signature 619 635 - -
Mibi12g1112 1095 PRINTS Disease resistance protein signature 191 206 - -
Mibi12g1112 1095 PRINTS Disease resistance protein signature 368 382 - -
Mibi12g1112 1095 PRINTS Disease resistance protein signature 271 285 - -
Mibi12g1112 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 435 IPR027417 -
Mibi12g1112 1095 Gene3D - 333 420 IPR042197 -
Mibi12g1112 1095 SUPERFAMILY L domain-like 547 889 - -
Mibi12g1112 1095 Pfam Rx N-terminal domain 5 89 IPR041118 -
Mibi12g1112 1095 PANTHER DISEASE RESISTANCE PROTEIN RP 46 863 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1112 Mibi-ChrMibi12 26347558 26356214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1112 190 375 WRKY Transcription Factor Family AT5G45050 26.984 2.11e-06 50.1