Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1091 ATGGAGCTATTCCCAGCACAGCCAGATTTGTCTTTGCAAATCAGCCCTCCAAACCCCAAACCCATCCCTCCTTCTTCATCATCCAATTATTGGAGCAGCAGCCGAGATAATCTTCACACTTCTAATTCTAATGGAGGAAGTGAACACCTTCGTTTGGGTTTCTGGAAGACAGCCTTTGACTCCAAATCCAACCCTCCTAATTCCTCCTTCGACCTCTCCCTCTCCTCTCTTCATCATCATACTACTAACCATCTTATTACTTCCCAAACAACCCCTCCTCCTCCTTCCTCTTCACTCTCCACCACCAACAACAACAACTCCTCTAATAACCTCACTAACTTCCACCCTCATTTACTCCATAATAATGCCAATCCCTCCTCAACGTCGTCGTTTCAACACACCTTGGGATTTCTCAGACCCATCCGAGGAATCCCTCTCTACCAAAACCCTCCTCCTCTTGTTGATTCTCATACAAATATCAATTATCCCACTCCCGCTCTTACTCATCCTCCAATATCTAACAATAATAATCATATTATTTTGACCTCTTCTTCAACCACACCTTCCTCACACCCTACTTTTCAATCTCATCATCATCATCATCAAAGTTTGATGAGGTCGAGATTGCTGTCTCGTTTTCCTGCCAAGCGAAGTATGAGAGCCCCTCGCATGCGTTGGACTACCACCCTCCATGCTCGCTTTGTCCATGCCGTTGAGCTCCTGGGCGGCCATGAAAGGGCAACCCCAAAATCGGTTCTTGAGCTCATGGATGTCAAGGATCTCACTTTAGCTCATGTTAAATCCCATCTTCAGATGTACCGTACGGTGAAAACCACAGACAAAGCAGCTGCTTCCTCAGGGCAATCTGATGTATATGATAATGGATCATCGGGAGATAATTCTGAAGAATTCATGTTTGACATGAACAATTCAAGAAGGTCTGATCTATCTACCAAGCAAGCAAAAGAAGGTGCTAATAATCCTGATAAAGACCATCATGGGCTTTGGAGCAACTCTTCCAGGGAAGTTTGGTTGCATGGGAAGCCAAAGCTGGATTATTGTGCAGGGAACTTGAGTTCTTTTGAGATGGAAATAGATCCAAAATGCCTAAGTTACGAGAGAGTATCTGATGGAAGTGCATCGTCAGATGTTTCAGGAACAAGCCCCAAGAAACCGAATTTGGATTTGGAGTTTAGCTTGGGGCAGCCACTTTGA 1215 0.4477 MELFPAQPDLSLQISPPNPKPIPPSSSSNYWSSSRDNLHTSNSNGGSEHLRLGFWKTAFDSKSNPPNSSFDLSLSSLHHHTTNHLITSQTTPPPPSSSLSTTNNNNSSNNLTNFHPHLLHNNANPSSTSSFQHTLGFLRPIRGIPLYQNPPPLVDSHTNINYPTPALTHPPISNNNNHIILTSSSTTPSSHPTFQSHHHHHQSLMRSRLLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASSGQSDVYDNGSSGDNSEEFMFDMNNSRRSDLSTKQAKEGANNPDKDHHGLWSNSSREVWLHGKPKLDYCAGNLSSFEMEIDPKCLSYERVSDGSASSDVSGTSPKKPNLDLEFSLGQPL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1091 404 Pfam Myb-like DNA-binding domain 223 274 IPR001005 -
Mibi12g1091 404 MobiDBLite consensus disorder prediction 316 336 - -
Mibi12g1091 404 Gene3D - 221 278 - -
Mibi12g1091 404 MobiDBLite consensus disorder prediction 25 47 - -
Mibi12g1091 404 MobiDBLite consensus disorder prediction 83 131 - -
Mibi12g1091 404 MobiDBLite consensus disorder prediction 279 315 - -
Mibi12g1091 404 MobiDBLite consensus disorder prediction 184 203 - -
Mibi12g1091 404 MobiDBLite consensus disorder prediction 1 47 - -
Mibi12g1091 404 MobiDBLite consensus disorder prediction 375 389 - -
Mibi12g1091 404 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 222 275 IPR006447 GO:0003677
Mibi12g1091 404 MobiDBLite consensus disorder prediction 374 404 - -
Mibi12g1091 404 MobiDBLite consensus disorder prediction 279 336 - -
Mibi12g1091 404 FunFam Myb family transcription factor 220 278 - -
Mibi12g1091 404 SUPERFAMILY Homeodomain-like 219 275 IPR009057 -
Mibi12g1091 404 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 403 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1091 Mibi-ChrMibi12 26110619 26115193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1091 1 403 G2-like Transcription Factor Family AT4G17695 35.817 3.68e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi12g1091 Myb_DNA-binding 2e-05 CL0123