Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1089 ATGTATGGGGATTGTCAAGTGATGTCAAGTATGGGAGGTAACGTGGTGGTGAACTCAGAAACGCTCTTCTCTTCCTCAATCCAAAACTCCAACTTCAACTTCATACCCACCATACCTTTTCATCAACCTTTCCAACCTCCTCCCTTGAAAGAAGAAGAGGGAGCTATGATAATGAGAGGGAAGGAAGAGATGATGATGGAAAGTGGGTCAGGAAGTGAACAAGCTGATCAAGAAAAATCTGGGAATGAACAAGAAAGTGAACAGCCAACAGCCAACAAGAAGAAACGTTACCATAGGCATACGGCTCGTCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCACATCCAGATGACAAGCAAAGGATGAAGCTGAGCCAAGAGCTGGGGTTAAAGCCACGCCAAGTGAAGTTCTGGTTCCAAAATCGTCGAACTCAGATGAAGGCTCAACAAGATAGAGCAGATAATGTGATACTGAGGGCAGAAAATGAGAACTTGAAGAATGAGAATTATCGTCTACAAGCAGCATTGCGTAATGTGATGTGTCCCAATTGTGGGGGTCCAGCTATGATGGGTGCTGATTTGGGCATGGATGACCATCAACTTCGCCTTGAAAATGCTCGCCTCAGAGAAGAGCTAGAACGAGTGTGTTGTCTCACATCAAGATACGCAGGAGGGCGTGCAATGCAAACAATGGCTTCACCACCACCACCACATCATCAATCCCTATTAGCCCCTTCATTGGATTTGGACATGAACATATACTCAAGGCACTTCACTAGTGATCATACTTCTGAGATGATTCCTTTCCCAATGTTGCCTCCTTCTTCTTCAGATCATACTTCTCCATTCCCAGATGGTACTAGTGGCCTCTTATTGATGGAAGAAGATAAGTCTCTTGCTTTGGAGCTCTCCGTGTCGTCCATGGATGAACTAGTTAAACTTTGTCAGGCGAATGAGCCGCTTTGGATAAGAAATAATGAGAATGAGAGGGAGATTCTGAATTTTGAGGAGCATGCTAGGCTCTTTCATTGGCCTCTCAACCTTAAGAACCATTCTACTGAACTTAGGAGAGAAGCTAGCCGTGACACTGCTGTGGTTATAATGAATAGTGTCACTCTTGTTGATGCCTTCCTTGATGCTATGAAGTGGATGGAATTGTTCCCTACCATTGTTTCTAGGGCAAAAACTGTACAAGTTATATCATCAGGTGCTTCTGGTCATGCGAGTGGGTCTCTTCAGCTGATGTATGCAGAATTACAAGTGATATCTCCACTGGTGCCGACTCGTGAGACTCACTTTCTTCGTTACTGCCAACAAAATGCCGAGGAGGGAACGTGGGCCATTGTTGATTTTCCTATTGATAGCTTCCAAGAAAGTTTTCACCATTCTTATCCCAGATATTGCAGAAGACCCTCTGGCTGTATTATCCAAGACATGCCAAATGGCTACTCAAGGGTAACGTGGGTGGAACATGCGGAAGTGGAAGAGAAACCAGTGCATCAGATATTCAGTGACTATGTGTACAGTGGAATGGCTTTTGGAGCACAGCGTTGGTTAGGGGTTTTGCAGAGACAATGTGAGAGAGTTGCCAGCCTCATGGCCAGGAATATCTCTGACCTTGGAGTGATACCTTCACCTGAAGCAAGAAAGAACTTGATGAAACTGGCACAGAGAATGATAAGAACGTTCAGCCTGAACATGAGCACCTCCAGTGGCCAATCATGGACGGCCTTATCTGATTCTGCTGAAGACACTGTTAGGATTACGACAAGGAAGGTTACTAACCCAGGCCAACCAAATGGAGTCATACTCAGTGCAGTCTCCACCACCTGGCTTCCTTATTCTCACTCCAAGGTCTTCGACCTCCTCAAGGACGAACGTCGCAGATCTCAGTTGGATTTTCTCTCCAATGGGAACTCTTTGCATGAGGTGGCTCACATTGCAAATGGCTCACATCCAGGAAATTGCATCTCCCTTTTGCGCATTAATGTGGCAAGCAACTCATCACAAAATGTAGAGCTAGTGTTGCAAGAGAGCTGCACCGATCAGTCAGGGAGCCTTGTGGTGTACGCAACCATTGATGTGGAGTCCATCCAGCTCGCCATGTCCGGCGAGGACCCTTCCTCCATATCCCTTCTTCCTCAAGGCTTCTTCATTGTTCCTTCATCAACAACAACAACAACATCAACCACCTCTGATCCAACTGAATCCGCAGGAGGAGAAGGAGGAGCACCGCCACCTACACCATCACCACATTCTTGTCTTCTAACTGTGGGGCTTCAAGTTCTGGCGAGTACAATCCCTTCTGCTAAACTCAACCTCTCCAGTGTAACAGCCATTAACAACCATCTCTGCAACACTCTCCACCAAATAGAAGCTGCTCTTTGCAATGACAATAATGCCCCTACAAATTATGTCCTCGAACCCACCACTACCACCACCACTTCTACCCCTAAGCAGTAA 2469 0.4605 MYGDCQVMSSMGGNVVVNSETLFSSSIQNSNFNFIPTIPFHQPFQPPPLKEEEGAMIMRGKEEMMMESGSGSEQADQEKSGNEQESEQPTANKKKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENENLKNENYRLQAALRNVMCPNCGGPAMMGADLGMDDHQLRLENARLREELERVCCLTSRYAGGRAMQTMASPPPPHHQSLLAPSLDLDMNIYSRHFTSDHTSEMIPFPMLPPSSSDHTSPFPDGTSGLLLMEEDKSLALELSVSSMDELVKLCQANEPLWIRNNENEREILNFEEHARLFHWPLNLKNHSTELRREASRDTAVVIMNSVTLVDAFLDAMKWMELFPTIVSRAKTVQVISSGASGHASGSLQLMYAELQVISPLVPTRETHFLRYCQQNAEEGTWAIVDFPIDSFQESFHHSYPRYCRRPSGCIIQDMPNGYSRVTWVEHAEVEEKPVHQIFSDYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIRTFSLNMSTSSGQSWTALSDSAEDTVRITTRKVTNPGQPNGVILSAVSTTWLPYSHSKVFDLLKDERRRSQLDFLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELVLQESCTDQSGSLVVYATIDVESIQLAMSGEDPSSISLLPQGFFIVPSSTTTTTSTTSDPTESAGGEGGAPPPTPSPHSCLLTVGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEAALCNDNNAPTNYVLEPTTTTTTSTPKQ 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1089 822 ProSiteProfiles 'Homeobox' domain profile. 91 151 IPR001356 GO:0003677
Mibi12g1089 822 Coils Coil 150 180 - -
Mibi12g1089 822 MobiDBLite consensus disorder prediction 725 739 - -
Mibi12g1089 822 CDD homeodomain 94 152 IPR001356 GO:0003677
Mibi12g1089 822 SMART HOX_1 92 155 IPR001356 GO:0003677
Mibi12g1089 822 SUPERFAMILY Bet v1-like 566 794 - -
Mibi12g1089 822 ProSitePatterns 'Homeobox' domain signature. 126 149 IPR017970 GO:0000981|GO:0006355
Mibi12g1089 822 SUPERFAMILY Bet v1-like 296 532 - -
Mibi12g1089 822 Pfam START domain 305 530 IPR002913 GO:0008289
Mibi12g1089 822 ProSiteProfiles START domain profile. 295 533 IPR002913 GO:0008289
Mibi12g1089 822 MobiDBLite consensus disorder prediction 64 101 - -
Mibi12g1089 822 CDD START_ArGLABRA2_like 299 529 - -
Mibi12g1089 822 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 92 797 IPR042160 -
Mibi12g1089 822 FunFam Homeobox-leucine zipper protein GLABRA 2 304 529 - -
Mibi12g1089 822 MobiDBLite consensus disorder prediction 78 92 - -
Mibi12g1089 822 MobiDBLite consensus disorder prediction 725 753 - -
Mibi12g1089 822 FunFam Homeobox-leucine zipper protein HDG1 79 167 - -
Mibi12g1089 822 Pfam Homeodomain 94 149 IPR001356 GO:0003677
Mibi12g1089 822 SMART START_1 304 530 IPR002913 GO:0008289
Mibi12g1089 822 Gene3D - 350 515 IPR023393 -
Mibi12g1089 822 SUPERFAMILY Homeodomain-like 82 152 IPR009057 -
Mibi12g1089 822 Gene3D - 77 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1089 Mibi-ChrMibi12 26043420 26048888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1089 8 799 Homeobox Transcription Factor Family AT5G46880 58.107 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi12g1089 START 1.5e-42 CL0209