Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1085 ATGATCTCCGCCGAGGTATGCGAGCTCTTCATCCTCGAGCTCACCAAGGAGAACAAGAGGCGCACTCTTCAGAAGAACGACGTCGCCGCCCAAATAAAATCTGTTAAAGTCAGTAATCTTTCCCTGGGAGCAACTGAACAAGACATTAAGGAGTTCTTTTCTTTTTCTGGTGATATTGAATATGTTGAACTGAGGAGTCATGATGAACGATCTCAAATTGCTTATGTCACGTTCAAGGATGGACAAGGAGCTGAAACTGCTGCACTACTATCGGGAGCAACCATAGTTGATTCGTCTGTTACAATAGCTTTGGATCCAGAATACCGGCCTCTACCAGTTGCTGTGACATCACCTGTAACTGAAAGCAAGACTCCTGGTGGTGCTGAATCTGCTTTAAGAAAGGCAGAGGATGTAGTTACCGGCATGCTGGCAAAGGGCTTTGTCTTGGGGAAAGATGCCGTGAACAAAGCAAAGACATTCGATGAGAAGCATCAGTTATCATCAACTGCCTCTGCAAAAGTTACATCTTTTGATCAAAAAATCGGTTTCAGTGAGAAAATAACTGCTGGTGCTTCAGCCGTGGGTGGTCGAGTTCGAGATGTGGATCAAAAGTTTCAGGTTTCTGAAAAAACCAAAACGGCTTTTGCAGCTGCAGAACAGAAAGTCAATGAAGCAGGTTCTGCTATCATGAAAAATCGCTATATACTCACTGGGGCTTCATGGGTAACAGGTGCTTTCAGTAAGGTTGTTAAAGCAGCTGAAGATGTAGGACAGAAGACAAAGGAGAAAGTGAACAGTACAGAAGAGGAACAGAAGCAAAAGGATCAACATGGTCAGGTCCTCTCTGAGCCATCAAAAACAGCACCAACAACAGGTGAATAG 882 0.4433 MISAEVCELFILELTKENKRRTLQKNDVAAQIKSVKVSNLSLGATEQDIKEFFSFSGDIEYVELRSHDERSQIAYVTFKDGQGAETAALLSGATIVDSSVTIALDPEYRPLPVAVTSPVTESKTPGGAESALRKAEDVVTGMLAKGFVLGKDAVNKAKTFDEKHQLSSTASAKVTSFDQKIGFSEKITAGASAVGGRVRDVDQKFQVSEKTKTAFAAAEQKVNEAGSAIMKNRYILTGASWVTGAFSKVVKAAEDVGQKTKEKVNSTEEEQKQKDQHGQVLSEPSKTAPTTGE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1085 293 SUPERFAMILY RNA-binding domain, RBD 29 105 IPR035979 GO:0003676
Mibi12g1085 293 SMART rrm1_1 34 103 IPR000504 GO:0003723
Mibi12g1085 293 MobiDBLite consensus disorder prediction 257 293 - -
Mibi12g1085 293 FunFam RNA recognition motif-containing protein 28 103 - -
Mibi12g1085 293 Gene3D - 29 103 IPR012677 -
Mibi12g1085 293 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 24 271 - -
Mibi12g1085 293 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 95 IPR000504 GO:0003723
Mibi12g1085 293 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 118 IPR000504 GO:0003723
Mibi12g1085 293 Coils Coil 250 270 - -
Mibi12g1085 293 MobiDBLite consensus disorder prediction 257 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1085 Mibi-ChrMibi12 25990012 25997147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1085 1 127 CCAAT-HAP5 Transcription Factor Family AT3G48590 35.461 2.33e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1085 12 25990012 25997147 Mibi12g1085 12 25990012 25997147 ECH