Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1062 ATGGCTCTTCTTGACACTCTTTCTTCTAATGAACTTTACAACTTCATTATCCATGAAACTATCTCTGCAACCCCATTTAGCAGCCATTGTGATTCCATTTCCTCCTCTGAAATTAATAATAACAATGTCTTGCTGGAGAATAGAGTGATGGACAATAATCCACTAGAACATGACCTTGCTTCTGCTTCATCTTTTGGCAATCTTCTCTCTTCTTTTTCAAGGAAACGCCATTCTGATGAGCTTCATCATGAGATTCCTGTTTCTGTTCAAGGAAGGAAGAAGAGAAGAAGGAAGCCAAGAGTTTGTAAGAACAGAGAAGAAGCAGAAACTCAGAGAATGACTCACATTGCTGTTGAAAGAAATCGCCGCAAGCAGATGAATGAATATCTCGCAGTACTTCGTTCACTCATGCCTGAATCTTATGTCCAAAGGGGTGACCAGGCATCTATTGTGGGTGGTGCTATTGAATTTGTGAAGGAGCTTGAGCATTTGTTGCAATCACTTGAAGCTAAGAAGTTGCAGATTCTGCAACAAGAAGTAGCACAAAACAATGAAGATGATTGTTCTTCATCTTCTACTTCTCCTTCTTCTTCTGCTTCTTCCATTTTCAAGCTCATGTTGAATCCTCCTTTTGCACAATTCTTTGCTTATCCTCAGTACACATGGTCTCAGGCTCCAACCAAATACCCTTCCAAGACTAAAGCAGCCATTGCTGATATTGAGGTTACTCTGATAGAGACACATGCAAACCTTAGAATTCTGTCAAGAAGAAGCCCAAGGCAATTGTCAAAACTTGTCTCTGCTTTTCAAACTCTCTGCCTTACCATCCTTCATCTTAATGTCACCACCATTAACCCTTTAGTCCTTTACTCTATCAGTGCCAAGGTTGAAGAAGGATGCCACCTTGGTTCAGCAGAAGATATAGCAACTGCGGTTCATCATTTGCTCAGAAGAATTGAGGAGGAAGCATCCCTTTGTGGTTGA 984 0.4085 MALLDTLSSNELYNFIIHETISATPFSSHCDSISSSEINNNNVLLENRVMDNNPLEHDLASASSFGNLLSSFSRKRHSDELHHEIPVSVQGRKKRRRKPRVCKNREEAETQRMTHIAVERNRRKQMNEYLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEHLLQSLEAKKLQILQQEVAQNNEDDCSSSSTSPSSSASSIFKLMLNPPFAQFFAYPQYTWSQAPTKYPSKTKAAIADIEVTLIETHANLRILSRRSPRQLSKLVSAFQTLCLTILHLNVTTINPLVLYSISAKVEEGCHLGSAEDIATAVHHLLRRIEEEASLCG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1062 327 MobiDBLite consensus disorder prediction 88 108 - -
Mibi12g1062 327 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 110 161 IPR011598 GO:0046983
Mibi12g1062 327 PANTHER MAX DIMERIZATION, MAD 71 323 - -
Mibi12g1062 327 SMART finulus 116 167 IPR011598 GO:0046983
Mibi12g1062 327 Coils Coil 158 178 - -
Mibi12g1062 327 Pfam Helix-loop-helix DNA-binding domain 111 162 IPR011598 GO:0046983
Mibi12g1062 327 CDD bHLH_AtFAMA_like 113 172 - -
Mibi12g1062 327 Gene3D - 102 180 IPR036638 GO:0046983
Mibi12g1062 327 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 109 177 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1062 Mibi-ChrMibi12 25724533 25726695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1062 102 296 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 57.436 6.27e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g1062 HLH 1.8e-10 No_clan