Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1060 ATGGCCACTTTAGAATCTGGACTCACAGTCTTGGGATCTTTCCGCTATTCTACTAAGTACCCTTCATCTTCCAAACCATTCGATTCCATAAAGTTCAATCTTTCCACTTCTCTTCTTCCCATTTCCCACAATTTCATCCTCCCCTCAATTTCTTCTTCCATAGACTCTCGCACAAGGCTCTGCTTCGAATTATGCTCTGCTTTGCAAGAGGCGGCAACAGAAGAAAAACCAGAGCAAACCCAGGAAACCAACATCAAGAAGAAGCTCTACGTGTTTAATCTACCATGGTCTCTCTCGGTGGTGGACATTAAGAACCTCTTTGGTCAATGCGGAACCGTAATCGATGTCGAGATAATAAAAAATAAAGATGGGAAGAGTAGAGGATTTGCCTTCGTCACTATGGCTACTGGGGAAGAGGCTCAAGCTGCTATTGAGAAACTTGACTCTCATGAATTGTCTGGCAGGATAATAAGGGTAGAGCTTGCAAAGAGATTCAAGAAACCTTCTCCTCCACAACCTCCTAATACTCCCCCTGCTGGTGAAACAAGCCATAAAATTTATGCGTCGAATCTTGCATGGAAAGCAAGATCTAGCCATCTCAGAGATTTCTTCACGGATAGTTTTAAATCCCCTGTTTCGGCCAGGGTTGTCTTCGACAGCCCTAATGGAAGATCTGCTGGCTATGGATTTGTTTCTTTTGCTACAAGGGATGAAGCAGAGGCTGCCATTTCTACTCTGGATGGGAAGGAATTAATGGGGCGACCACTTCGCCTAAAATTCAGTGAAAGGACTGTTAAAGAACCTGGGGACGAGGAAGGGGAAGAGCAAGGTTCTGTTGATGAACCGGCAGAATCGTAG 858 0.4476 MATLESGLTVLGSFRYSTKYPSSSKPFDSIKFNLSTSLLPISHNFILPSISSSIDSRTRLCFELCSALQEAATEEKPEQTQETNIKKKLYVFNLPWSLSVVDIKNLFGQCGTVIDVEIIKNKDGKSRGFAFVTMATGEEAQAAIEKLDSHELSGRIIRVELAKRFKKPSPPQPPNTPPAGETSHKIYASNLAWKARSSHLRDFFTDSFKSPVSARVVFDSPNGRSAGYGFVSFATRDEAEAAISTLDGKELMGRPLRLKFSERTVKEPGDEEGEEQGSVDEPAES 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1060 285 PANTHER OS02G0815200 PROTEIN 68 261 - -
Mibi12g1060 285 MobiDBLite consensus disorder prediction 259 285 - -
Mibi12g1060 285 Gene3D - 65 167 IPR012677 -
Mibi12g1060 285 Gene3D - 168 279 IPR012677 -
Mibi12g1060 285 SUPERFAMILY RNA-binding domain, RBD 76 171 IPR035979 GO:0003676
Mibi12g1060 285 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 157 IPR000504 GO:0003723
Mibi12g1060 285 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 186 257 IPR000504 GO:0003723
Mibi12g1060 285 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 87 164 IPR000504 GO:0003723
Mibi12g1060 285 SMART rrm1_1 185 259 IPR000504 GO:0003723
Mibi12g1060 285 SMART rrm1_1 88 160 IPR000504 GO:0003723
Mibi12g1060 285 SUPERFAMILY RNA-binding domain, RBD 167 264 IPR035979 GO:0003676
Mibi12g1060 285 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 184 263 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1060 Mibi-ChrMibi12 25705812 25708346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1060 89 271 Eukaryotic Initiation Factors Gene Family AT4G34110 27.000 8.39e-14 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1060 12 25705812 25708346 Mibi12g1060 12 25705812 25708346 ECH