Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1054 ATGGCTCTCCCTCCTGCCTCAACCCTCTCCTCCCCATTTTCTACTACCAGTGCTGCTGCAAACTGCAAGCTTTCACTTCCCCCTAAATGCTGCTCCTTCTCCTTCTTTTCCCGACGATCATCTTACCCCTCCGTCGTCACGGCCTCCCTTTCCTCTTCCTCTTCTGCTAAAGCAGATGATTCCAAGCCGCAGCTGCTTCTTCAAGTCAATGATTTGAGAGCTAAGATTGTCGAATCCGATGTTCATATCCTTCATGGCGTTAACCTCACCGTCAACCAAGGAGAGGTTCATGCCATCATGGGAAAGAACGGTTCCGGAAAGAGCACTTTTGCAAAGGTCCTTGTTGGCCATCCAGATTATGAAGTCACAGGAGGCAGTGTATTGTTCAGAGGGGAAAACCTGCTTGACATGGAACCTGAGGAAAGGGCACTTGCTGGCCTTTTTATGAGCTTCCAGTCCCCTGTTGAGATCCCTGGTGTTTCTAATTATGATTTTCTGGTTATGGCTTATAACTCACGGCAAAGAAAACTTGGCCAGCCTGAGCTTGGTCCACTTGAGTTCTTGCCTTACCTAATGGAGAAAGTCAATCTCGTGAACATGAAGGAAGACTTTTTAGATAGAAATGTAAATGAAGGATTTAGTGGTGGTGAACGGAAGCGCAATGAAATTTTGCAGCTTGCGGTTTTGGGGGCAGATTTGGCTATTTTGGATGAAATAGATTCTGGATTGGATGTTGATGCACTGAGAGATGTATCAAATGCTGTGAATCAGATTCTGACCTCTAAAAATTCTCTGTTGATGATAACCCATTACCGACGAATTCTGGATCTCCTAAATCCTACACATGTTCACATCATGGATAGGGGAAAGATTGCAAGGACGGGTGACTTAGCCATGGTTGAAGTTATTGAAGCAGAGGGATATGAAATGGTATCCGCCTAA 942 0.4544 MALPPASTLSSPFSTTSAAANCKLSLPPKCCSFSFFSRRSSYPSVVTASLSSSSSAKADDSKPQLLLQVNDLRAKIVESDVHILHGVNLTVNQGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSVLFRGENLLDMEPEERALAGLFMSFQSPVEIPGVSNYDFLVMAYNSRQRKLGQPELGPLEFLPYLMEKVNLVNMKEDFLDRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVSNAVNQILTSKNSLLMITHYRRILDLLNPTHVHIMDRGKIARTGDLAMVEVIEAEGYEMVSA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1054 313 CDD ABC_FeS_Assembly 67 308 IPR010230 GO:0005524
Mibi12g1054 313 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 37 312 IPR010230 GO:0005524
Mibi12g1054 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 297 IPR027417 -
Mibi12g1054 313 Gene3D - 66 312 IPR027417 -
Mibi12g1054 313 Pfam ABC transporter 84 238 IPR003439 GO:0005524
Mibi12g1054 313 ProSitePatterns ABC transporters family signature. 213 227 IPR017871 GO:0005524|GO:0016887
Mibi12g1054 313 TIGRFAM sufC: FeS assembly ATPase SufC 67 310 IPR010230 GO:0005524
Mibi12g1054 313 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 67 313 IPR003439 GO:0005524
Mibi12g1054 313 SMART AAA_5 93 281 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1054 Mibi-ChrMibi12 25594306 25598338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1054 80 295 Calmodulin-binding Proteins AT2G36910 23.982 4.65e-08 52.8