Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1049 ATGTCAAAGAAGAATGTGAAGTGTGACGGTGGCGTAACGTTGTTAACGGTAACAACCGCCACCTGCCGCACTGCCACCCTGTGGGTAACAGAAGAAGACGACGACAAAATTACAATTCACCGACTTGACCCAGAAACAAATCGGAAACGTGAAACTCCCTCAAACCCTTCTCAAGGGCATTTTCGTCACTTCACCTCCCCGCCCCTTCCTCTCATATATAAAAACCCCAAACACAACATTTTGCTGTTTCCTCTGCAAATTTCAGCACTGTATTTTTTGCTCAGGAGGTGTTCGGTTTTCCAGCACCCCCTGAGGTTTCTTCTTTCTCCCATGGCCTCCGATTCATACACCGACAAGAATGTTGTCTTCAGAAAACTCAAGGCTAAGTCCGATAACAAGATGTGTTTTGATTGCAATGCCAAGAATCCAACTTGGGCATCGGTTACATATGGGATCTTCCTCTGTATCGATTGCTCGGCTGTTCATCGTAGCCTTGGTGTGCACGTCAGTTTTGTGAGATCTACGAATTTGGACTCATGGAGTCCTGAGCAGCTAAGAACAATGAGCTTTGGAGGAAACAATCGTGCGCACGTTTTCTTTAAGCAACATGGTTGGACTGATGGTGGAAAAATCGAGGCCAAGTATACATCTAGAGCTGCTGAGTTGTATAGACAACTTCTCTCCAAGGAAGTAGCTAAAAGTATGGCAGAGGAGGCTGAATTGCCATCCTCACCTGTTGCTTCTCAGTCTGCACAAGTGGCTAATGGACTTCCTGAAGTTAGGACCAATGAAACACCCAAAGAAAACATTCTGGAAAAGGCAGATATACCTGAAGGCACTGCTTCCTCTAAACCTTCTCATACAATAATTACCAGTACTGTCAAGAAACCCATGGTTGCCAAAAAAGGTGGCAAGACTGGGGGCCTTGGTGCCCGGAAGCTTACTAAAAAGCCGAGTGAATCTCTATATGAGCAGAAGCCAGAAGAAGCACCTGCTCCTGTTTCTTCCTCATCAAGCCATGCTTCTGCACCTGGGCCACCCTTGGCATCTCGGTTCGAGTATGTTGAAAATGTCCAGTCATCTGAGTTAAATTCTGGAGATTCTCACGTACTTAATCATGTGGCTCCACCAAAGTCATCTAGCTTTTTTGCTGATTTTGGGATGGATAATGGCTTTCCAAAACGGTCTGGGTCAGATTCCTCAAAAGTGCAAATTCAGGAATCTGATGAAGCAAGGAAGAAGTTCTCAAATGCTAAATCTATATCCTCAGCCCAATTTTTTGGAGATCAGAACAAAGCTGCAGATATGAATGGTCAAGCTACTTTGGCAAAGTTCTCGGGTTCAACTGCCATCTCTAGTGCAGATCTTTTTGGTAACTCATCGGATCCCTCCATTGATATCACTGCAAGTGACCTCATCAATCGACTATCTTTCCAGGCACAGCAGGATATCTCTTCCATAAAAAACATTGCTGGGGAGACCGGGAAGAAGCTGAGTTCTTTGGCATCCACTTTGATAACAGATTTTCAGGACAGAATCCTCTAA 1545 0.4492 MSKKNVKCDGGVTLLTVTTATCRTATLWVTEEDDDKITIHRLDPETNRKRETPSNPSQGHFRHFTSPPLPLIYKNPKHNILLFPLQISALYFLLRRCSVFQHPLRFLLSPMASDSYTDKNVVFRKLKAKSDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHVSFVRSTNLDSWSPEQLRTMSFGGNNRAHVFFKQHGWTDGGKIEAKYTSRAAELYRQLLSKEVAKSMAEEAELPSSPVASQSAQVANGLPEVRTNETPKENILEKADIPEGTASSKPSHTIITSTVKKPMVAKKGGKTGGLGARKLTKKPSESLYEQKPEEAPAPVSSSSSHASAPGPPLASRFEYVENVQSSELNSGDSHVLNHVAPPKSSSFFADFGMDNGFPKRSGSDSSKVQIQESDEARKKFSNAKSISSAQFFGDQNKAADMNGQATLAKFSGSTAISSADLFGNSSDPSIDITASDLINRLSFQAQQDISSIKNIAGETGKKLSSLASTLITDFQDRIL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1049 514 MobiDBLite consensus disorder prediction 39 62 - -
Mibi12g1049 514 MobiDBLite consensus disorder prediction 240 348 - -
Mibi12g1049 514 FunFam ADP-ribosylation factor GTPase-activating protein AGD10 111 247 - -
Mibi12g1049 514 SUPERFAMILY ArfGap/RecO-like zinc finger 122 234 IPR037278 -
Mibi12g1049 514 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 115 514 - -
Mibi12g1049 514 ProSiteProfiles ARF GTPase-activating proteins domain profile. 120 238 IPR001164 GO:0005096
Mibi12g1049 514 Pfam Putative GTPase activating protein for Arf 122 220 IPR001164 GO:0005096
Mibi12g1049 514 PRINTS HIV Rev interacting protein signature 172 193 IPR001164 GO:0005096
Mibi12g1049 514 PRINTS HIV Rev interacting protein signature 132 151 IPR001164 GO:0005096
Mibi12g1049 514 PRINTS HIV Rev interacting protein signature 151 168 IPR001164 GO:0005096
Mibi12g1049 514 Gene3D Arf GTPase activating protein 109 250 IPR038508 -
Mibi12g1049 514 MobiDBLite consensus disorder prediction 243 259 - -
Mibi12g1049 514 CDD ArfGap_ArfGap2_3_like 118 233 - -
Mibi12g1049 514 SMART arf_gap_3 120 236 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1049 Mibi-ChrMibi12 25540910 25546329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1049 123 201 C2H2 Transcription Factor Family AT4G21160 46.250 1.03e-19 88.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1049 12 25540910 25546329 Mibi12g1049 12 25540910 25546329 ECH