Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1035 ATGTCTCCACCACTGCTGGTTGCTGAAGAGGAAGGGCATAGCAATATTTCAACTGTAGCATCTTCACTGTCCTTGGACTCTATCTCCCACAATGTAACTGCATTAAAAGAGCGCAATTACCTTGGATTGTCAGATTGTTCATCATCAGTTGACAGTTCTAGTGTCCCAAGCATATCAGAGGAGAAAAAGGACAACATGAATTTGAAGGCTACAGAGTTGAGATTGGGTCTTCCTGGATCCCTATCTCCTGAAAGGAATTCAGATCTTTATGCATCGAACCCAACAAAGCTTGATGAGAAACCATTATTTCCATTGCTTCCTACAAAAGATGGAATCTGTTCATTATCCCAAAAAGTTGTGGTTTCAGGAAACAAGAGAGGTTTCTCGGACACCATGGATGGTTTCCCGGAGGGAAATTTTACTTGTAATTCAGGGATAAATGTAATGTTACCTAGACCTTCTGCAGCTCAGCCAACCTATATGAAAGAAATGCCTGCTAAAGTTCCACAGGATCGGCCTTCTGCAGCCAATGGCCTTAGTCATAATCATACCTGTACTCCTGCTAATGGTAGTGTGCCAGCTGCTAAGGCCCAAGTTGTTGGTTGGCCTCCTATAAGATCATATAGGAAGAATTCATTGGCCAATACTTCAAAGAATAATGATGAAGTTGATGGAAAACCCGGTCCTGCTGCCCTCTTTGTAAAGGTGAGCATGGATGGTGCTCCTTATCTAAGGAAAGTGGATCTAAGGAATTATACAACATATCAAGAACTGTCTTCTGCCCTCGAGAAGATGTTCAGCTGTTTTACCTTAGGTCAATGTGGTTCTCATGGTGCTCCTGGCAGAGAAATGTTAAGTGAGAGCAAGTTGAGGGATCTTCTACATGGTTCTGAGTACGTTCTCACTTATGAAGATAAAGATGGTGATTGGATGCTTGTAGGGGATGTACCATGGGGGATGTTCATTGACACATGCAAGAGGCTAAAAATTATGAAGGGTTCTGATGCCATTGGCTTGGCTCCCAGAGCTATGGAAAAATCCAAGAGCAGGAGCTAG 1056 0.4299 MSPPLLVAEEEGHSNISTVASSLSLDSISHNVTALKERNYLGLSDCSSSVDSSSVPSISEEKKDNMNLKATELRLGLPGSLSPERNSDLYASNPTKLDEKPLFPLLPTKDGICSLSQKVVVSGNKRGFSDTMDGFPEGNFTCNSGINVMLPRPSAAQPTYMKEMPAKVPQDRPSAANGLSHNHTCTPANGSVPAAKAQVVGWPPIRSYRKNSLANTSKNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLRNYTTYQELSSALEKMFSCFTLGQCGSHGAPGREMLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWGMFIDTCKRLKIMKGSDAIGLAPRAMEKSKSRS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1035 351 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 66 338 IPR003311 GO:0005634|GO:0006355
Mibi12g1035 351 FunFam Auxin-responsive protein 226 343 - -
Mibi12g1035 351 Pfam AUX/IAA family 71 342 IPR033389 -
Mibi12g1035 351 ProSiteProfiles PB1 domain profile. 231 335 IPR000270 GO:0005515
Mibi12g1035 351 Gene3D - 228 345 - -
Mibi12g1035 351 SUPERFAMILY CAD & PB1 domains 229 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1035 Mibi-ChrMibi12 25299921 25302808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1035 233 345 B3 DNA Binding Superfamily AT1G30330 27.434 1.25e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi12g1035 AUX_IAA 3.2e-90 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1035 12 25299921 25302808 Mibi12g1035 12 25299921 25302808 ECH