Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1029 ATGCCTCGTCACCAACCCAATAATAATAATAATAATATTCCCAGTCGTGATCACCACCATCATCATCAAGAAACCGTCATCGACGTCAAAAAGCCGGTGAACTTCACCGGAGGTCTCGAGTTTTCGGGCCTAACCTATACAGTAACAAAGAGGAAGAAGGTTGATGGAAGTTGGGTGAAAGAGAACGTAGACTTGCTTCATAACATTACTGGTTATGCACCAAAGGGTTGTATCACGGCGGTGATGGGTCCCAGTGGCGCCGGAAAGTCAACCTTCTTGGACGGTCTTGCCGGAAGAATCGCCAGCGGCAGCCTTAAGGGAAGGGTTTGTTTGGATGGTACGGATACTAACCCTACTTTGATAAAAAGAACTTCTGCTTATATCATGCAGGATGATAGACTCTTCCCAATGCTCACCGTCTATGAAACCTTCATGTTCGCCGCCGATTTTCGCCTTGGCCCACTTCCTCTTGCTGAGAAGAAGCAACGAGTCGAGAAGCTCATCGAACAGCTCGGCTTATCTTCGACCCGGAACACGTACATAGGAGACGAGGGGACGAGGGGAGTGTCCGGAGGGGAGAGGCGACGCGTATCAATCGGGGTCGACATAATCCACGGGCCATCCCTCCTATTCCTGGACGAGCCTACGTCCGGCCTGGACTCTACCAGCGCCCACAGCGTCATCGAGAAGGTGCATGACATAGCACGTAACGGGAGCACAGTGATCCTAACCATCCATCAACCATCATCAAGAATCCAACTGCTTCTTGACCACATGATCATCCTAGCAAGAGGGCAGCTCATGTTTCAGGGATCACCTAAAGATGTGTCACTCCATTTGGGAAGAATGGGACGTAAAGTACCAAAGGGAGAGAACCCAATTGAGCATCTTATTGATGTGATTCAGGAATATGATGTTTGTGATGTTGGTGTAGGGGCTCTTGCTGAGTTTGCCCGCACTGGAGTGAAGCCTCCTCCTTTGCCTGATCAGGAGTTTTCTCTCTCCACCGTCGTTCCGTCGATGACGCCGGGCCGGAATAATCACCGGCTTGCGGATGATTTTGATCATAGTGTGAGGAGTATGATGAGAAGCCCTCGTACGCCTCACAGTGGTTTGTTTCAGATGTTAACACCTTCTCGCTTTAAGACTGAACATAAACTGCACAACAATCATCCCTTGAGTAATGCTTCGCCAGGGTACTACACATACTCAAGCGATATCCTTCCAGCGACACCAACACCTCACAGCAGCGACTACACGGTGAACGAGAATGACTACCTAACACCACCAGACGCCATAATTCCAAAGCATCTTGGTCCAAAATTCGCAAACTCATTCTTAACAGAGACATGGATTCTCATGCGCAGGAACTTCATAAACATCCGTCGAACCCCAGAACTTTTCCTTTCCAGATTAATGGTCCTAACAGTCATGGGCTTCATGATGGCCACCATGTTCAAAAACCCAAAACAAGGAGCACAAGGCATCACCAATCGCATCAGCTTCTTCATCTTCACTGTTTGCCTCTTCTTCTTCTCATCCAATGATGCTGTCCCTGCTTTCATCCAAGAACGCTTCATCTTCATCAGAGAAACATCTCATAATGCTTACCGTGCTTCATCTTACACTATTGCTGGAATTATCACTCACACTCCGTTTCTTGTGCTACAAGCAACCGTGTATGCTGTGATTGTGTGGTTTGCTTTGAAGCTTCAGGGTCCCTTTTTGTACTTTGTGTTGGTTCTCTTCGTTTCGCTTCTTTCGACAAATTCTTTCGTGGTTTTCGTCAGCTCGGTTGTCCCGAATTACATCCTTGGTTATGCTGCTGTTATAGCCTTCACCGCTTTGTTCTTCTTGTTCTGTGGTTATTTCTTGAGTAGCCAGGATATTCCTATTTATTGGCGTTGGATGAACAAGATTTCAACCATGACGTATCCTTATGAGGGGCTTCTGATCAATCAGTATCGGAATTCGGATGTGTTTGGGCAAAACCTGGACAAGTCTTTTATTACTGGTGTCGATATCTTGAATGGTCTTCATATAAGTACTGATCCTTTTAGGAAGTGGGAGAATGTGATTATAATGCTGTTATGGGCTGTCTTTTATAGGATTTTGTTTTATTTGGTTCTTCGTTTTGCTTCCAAAAACCAGAGGTCGTAG 2160 0.4648 MPRHQPNNNNNNIPSRDHHHHHQETVIDVKKPVNFTGGLEFSGLTYTVTKRKKVDGSWVKENVDLLHNITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIASGSLKGRVCLDGTDTNPTLIKRTSAYIMQDDRLFPMLTVYETFMFAADFRLGPLPLAEKKQRVEKLIEQLGLSSTRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARNGSTVILTIHQPSSRIQLLLDHMIILARGQLMFQGSPKDVSLHLGRMGRKVPKGENPIEHLIDVIQEYDVCDVGVGALAEFARTGVKPPPLPDQEFSLSTVVPSMTPGRNNHRLADDFDHSVRSMMRSPRTPHSGLFQMLTPSRFKTEHKLHNNHPLSNASPGYYTYSSDILPATPTPHSSDYTVNENDYLTPPDAIIPKHLGPKFANSFLTETWILMRRNFINIRRTPELFLSRLMVLTVMGFMMATMFKNPKQGAQGITNRISFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGIITHTPFLVLQATVYAVIVWFALKLQGPFLYFVLVLFVSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSQDIPIYWRWMNKISTMTYPYEGLLINQYRNSDVFGQNLDKSFITGVDILNGLHISTDPFRKWENVIIMLLWAVFYRILFYLVLRFASKNQRS 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1029 719 FunFam ABC transporter G family member 6 49 287 - -
Mibi12g1029 719 Gene3D - 39 283 IPR027417 -
Mibi12g1029 719 Pfam ABC-2 type transporter 449 655 IPR013525 GO:0016020|GO:0140359
Mibi12g1029 719 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 289 IPR003439 GO:0005524
Mibi12g1029 719 MobiDBLite consensus disorder prediction 1 23 - -
Mibi12g1029 719 Pfam ABC-2 type transporter 246 302 IPR043926 GO:0140359
Mibi12g1029 719 ProSitePatterns ABC transporters family signature. 189 203 IPR017871 GO:0005524|GO:0016887
Mibi12g1029 719 CDD ABCG_EPDR 39 271 - -
Mibi12g1029 719 SMART AAA_5 75 273 IPR003593 -
Mibi12g1029 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 277 IPR027417 -
Mibi12g1029 719 Pfam ABC transporter 66 217 IPR003439 GO:0005524
Mibi12g1029 719 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1029 Mibi-ChrMibi12 25205239 25208956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1029 26 303 Calmodulin-binding Proteins AT2G36910 26.761 8.39e-12 67.0