Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1028 ATGGAGGAATTGGATAACCAGTGTTTAAGACTTGTTAAGGTTTATATCCTTTGTTTTCTTCTGTTTATCAGATCAGCTTTTGCAACTGAAGATTTTGTGAGCATAGCGTGCTGTGCTGATTCAAACTATACAGATCCGAAGACTTCAGTGAATTACACGTCAGATTTTAGTTTCTACCAAGATAAAACAAGTTGCTTAGACACAAGTAAGCCCGTGGAGAACCATGCAGGCCATGGAAAAGCAAGAGTGTTTGATATAGATAAAGGAAAGCGATGTTACAACTTGCAAACAAAAAAGAATCAAGTGTATCTGCTAAGAGGCACATTTCCATCTGATGAATCACCGAATTCCTCTTTTGATGTTACAATTGGGGTTACCTCATTAGGTGTGGTAGATAAATCTTCTCAGGGCGTGGAATCACTTGAAGGGATTTTCATAGCTACAAAGAATTACACAGATTTCTGCTTGGTGAAGAATCAAGGAAATCCTTATGTTTCCCTGATTGAATTGAGGCCGTTGGACGAAGGGTACTTACTGAATTCACCTTCTAATGCCCTAAAAGTGATCACTAGAAATAACCTAGGGGCCACTGGAGATGACATCAGGTACCCACTTGACCCAAGTGACAGAATCTGGAAAGCTACTTCAAGTCCATCTTCATTTTCTCCCATATCATCAAATGCAAATATTTCCAGCCACAAAACGAATTTGACACCTCCTCTACAAGTCTTACAAACCGCTCTTACGCATTCTAAGAAATTGGAATTCATCCACAATGCCCTCAACCCTGGGAATTCTGAATACCATCTGATTCTCCACTTCCTTGAATTGAATAGCAGCGTCGGATTAGGAAAACGGGTGTTCAATATCTACGTCAACGGTGTCATCAAAGAGCCCAAGTTTGACATATTTGCTGGTGGATCAAACTATAGACAAGCTGTTTTGAACTTTTCTGCAAATGGTTCGCTGAATCTAACCTTGAGCAAGGCTTCTGGGTCTGAGAATGGACCTCTTTGTAACGCATATGAGATCCAAAAGGTTATCACCTGGATACAGGAGACCAACCAAACAGATTCGGAAGTGATGTTGAAGGTGAAAGAGCAATTGTTAGAGAATAACGGAGGGAATAAAGAGCTGGAGAGTTGGAATGGAGACCCTTGCATTCAGTTTCAATGGCAGCATGTAGGATGTGATCATTTAAGTGGTCGACTTGTCATCATTAAACTGGATCTTTCTTCGAGTAATCTCCGAGGACCGATTCCTTCCAGTATCACAGAGTTGTCCAACTTAAAAATACTGAACCTGAGCTACAATAGCTTTACTGGGAATATCCCCTCGTTTCTGCCTTCATCTTTGCTTACCTCAATAGATCTAAGCCACAATGATCTCACAGGATCGCTTCCATGGACCCTACCCTTACTGCCACAACTAAAGTCTTTGTATTTTGGTTGCAACAAGCATATGAACAGGGAGATTCCAACTTCCTTGAACAGCTTAGAAAACACTGATTATGGAAGTTGCAAATCTGGAGGAGACCCAGGAATTTCACAAAAGCAAATCATCATAGGCACTATTACATGTGGATTACTCCTGATAATTTTGGCAGTTGGAATTCTTTTCCGTTTCCATAGAAGAGGAAAATTAGTCCCCTGGAAAAAATCTGATGAAAAGGGATACCCAACAACCACAAATTTGATTTTCTCTTTATCCAGTAAAGATGACTTCTTCGTGAAGTCAGTATCCATTCAAACATTCACCTTGGAATACATAGAGTCAGCCACCCAAAACTACAAAACTTTAATTGGTGAAGGAGGGTTTGGGTCTGTTTACCGTGGCACTCTAGATGATGGCCAAGAAGTGGCTGTGAAGGTCCGTTCAGCAACATCAACTCAGGGAACTCGTGAATTCGACAACGAGGTAAACTTGCTTTCTACTATACGGCATGAGAACCTGGTGCCTCTTATTGGTTACTGTTGTGAAAAGGATCAACAAATTCTGGTGTATCCTTTTATGTCCAATGGTTCTTTACAAGACAGGCTTTATGGGGAACCAGCAAAGAGAAAACCATTAGACTGGCCAACCAGGTTATCTATTGCTCTAGGTGCAGCTCGAGGTTTGTCATATCTTCATACATTTTCGGGACGTTCTGTTATACATAGAGATGTCAAATCAAGCAACATACTTCTAGACCACAGCATGTGTGCCAAGGTAGCCGACTTTGGTTTCTCTAAATATGCTCCTCAGGAAGGAGACAGCGGTGCTTCTCTTGAAGTAAGAGGAACCGCCGGATATATGGACCCTGAGTACTATATAACCCAGCAATTATCTGCAAAGAGTGATGTGTTTAGCTTTGGTATCGTTCTACTTGAAATTGTGAGTGGCCGGGAACCTCTCAACACACAAAGACCACGGGATGAGTGGAACTTGGTGGAATGGGCTAAACCATACATAAGGGCATCGAAGATCGATGAAATAGTGGATCCTAGCATCAAGGGAGGATATCATGCAGAGACCATGTGGAGAGTAGTGGAAACATCACTGTCATGTATTGAACAATTCTCAGTGAATAGACCAAGCATGGCTGATATAGTCCGTGAGTTGGAGGATGCTCTGATTATAGAAAACAATGCATCAGAATACATGAAGTCCATAGAAAGCCTTGGAGGATCAAATAGATACTCCATTGTGATAGAGAAGAAGATGGTAGCCCCATCTCCATCTGCAACAGAATCAACGGTCTCTCCCAAAACCATATCCCACCCACAACCCAGATAG 2775 0.4166 MEELDNQCLRLVKVYILCFLLFIRSAFATEDFVSIACCADSNYTDPKTSVNYTSDFSFYQDKTSCLDTSKPVENHAGHGKARVFDIDKGKRCYNLQTKKNQVYLLRGTFPSDESPNSSFDVTIGVTSLGVVDKSSQGVESLEGIFIATKNYTDFCLVKNQGNPYVSLIELRPLDEGYLLNSPSNALKVITRNNLGATGDDIRYPLDPSDRIWKATSSPSSFSPISSNANISSHKTNLTPPLQVLQTALTHSKKLEFIHNALNPGNSEYHLILHFLELNSSVGLGKRVFNIYVNGVIKEPKFDIFAGGSNYRQAVLNFSANGSLNLTLSKASGSENGPLCNAYEIQKVITWIQETNQTDSEVMLKVKEQLLENNGGNKELESWNGDPCIQFQWQHVGCDHLSGRLVIIKLDLSSSNLRGPIPSSITELSNLKILNLSYNSFTGNIPSFLPSSLLTSIDLSHNDLTGSLPWTLPLLPQLKSLYFGCNKHMNREIPTSLNSLENTDYGSCKSGGDPGISQKQIIIGTITCGLLLIILAVGILFRFHRRGKLVPWKKSDEKGYPTTTNLIFSLSSKDDFFVKSVSIQTFTLEYIESATQNYKTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNEVNLLSTIRHENLVPLIGYCCEKDQQILVYPFMSNGSLQDRLYGEPAKRKPLDWPTRLSIALGAARGLSYLHTFSGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSGASLEVRGTAGYMDPEYYITQQLSAKSDVFSFGIVLLEIVSGREPLNTQRPRDEWNLVEWAKPYIRASKIDEIVDPSIKGGYHAETMWRVVETSLSCIEQFSVNRPSMADIVRELEDALIIENNASEYMKSIESLGGSNRYSIVIEKKMVAPSPSATESTVSPKTISHPQPR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1028 924 CDD STKc_IRAK 601 868 - -
Mibi12g1028 924 Gene3D Ribonuclease Inhibitor 353 511 IPR032675 -
Mibi12g1028 924 SUPERFAMILY Protein kinase-like (PK-like) 575 867 IPR011009 -
Mibi12g1028 924 Pfam Malectin-like domain 39 346 IPR024788 -
Mibi12g1028 924 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 671 880 - -
Mibi12g1028 924 SUPERFAMILY L domain-like 379 500 - -
Mibi12g1028 924 ProSiteProfiles Protein kinase domain profile. 595 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1028 924 SMART serkin_6 597 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g1028 924 FunFam Leucine-rich repeat receptor-like kinase 358 491 - -
Mibi12g1028 924 Gene3D - 186 348 - -
Mibi12g1028 924 ProSitePatterns Protein kinases ATP-binding region signature. 601 623 IPR017441 GO:0005524
Mibi12g1028 924 Gene3D Phosphorylase Kinase; domain 1 567 670 - -
Mibi12g1028 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 717 729 IPR008271 GO:0004672|GO:0006468
Mibi12g1028 924 Pfam Protein tyrosine and serine/threonine kinase 598 867 IPR001245 GO:0004672|GO:0006468
Mibi12g1028 924 MobiDBLite consensus disorder prediction 905 924 - -
Mibi12g1028 924 PANTHER OS07G0107800 PROTEIN-RELATED 33 871 - -
Mibi12g1028 924 Gene3D Transferase(Phosphotransferase) domain 1 671 887 - -
Mibi12g1028 924 FunFam Nodulation receptor kinase 561 670 - -
Mibi12g1028 924 MobiDBLite consensus disorder prediction 904 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1028 Mibi-ChrMibi12 25195010 25201441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1028 8 874 Receptor kinase-like Gene Family AT1G67720 35.644 1.62e-142 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mibi12g1028 Malectin_like 1.1e-50 CL0202