Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1010 ATGACCAGAAACAGCACAAAACAGATTCAAATGGCAGGAATACAACATGAGTGTGAGCATCCAAGGAAGGCCTTTGGATTGGCAGCTAGGGACTCATCTGGTGTTCTCTCTCCTTTCAACTTCTCTCGAAGGGAAACAGGAGAGAAAGATGTGAGATTCAAAGTTATGTATTGTGGAATATGCCACACCGACGCCAGCATGCTAAAAAACGATTGGGGCATTTCCGTCTATCCCCTTGTACCTGGGCATGAGATTGCTGGTGTGGTGACAGAAGTGGGAAGCAAGGTAGAAAAGTTTAAAGCTGGAGACAGGGTTGGCGTGGGATACTTGGTTGGGTCATGTCGGTCATGTCAAAGATGTTCAGAGGACCTTGAGAACCAATGCTCAGAACAAATACTCACTTCTGGTTCTAAGTATGGTGATGGCACTATGACACATGGAGGCTACTCTGACTTTATGGTTGTCGACGAACACTTCGTGGTTCACATTCCAGATGCTTTGACTCTTGATGTTGCAGCTCCCCTGCTTTGTGCTGGGATCACAGTGTATAGCTCTTTGAGGCATTTTGGTCTTGACAAGGCAGGCCTTCATGTGGGTGTGGTTGGTCTTGGTGGTCTTGGCCATATGGCTGTCAAGTTTGCCAAAGCCTTTGGAGCTAAGGTCACTGTCATTAGTACATCTCCTAACAAAAAGAAGGAAGCCACTGAACTTCTTGGAGCTGATTCCTTTATTGTCAGCCGTGAGCAAGATCAGATGCAGGCTGCAATGGAGACTTTGGATGGGATCATTGACACGGTTTCTGCACAACATCCTCTGGGGCCTTTGATCGGTTTGTTGAGGTCTAATGGTAAAATTGTATTGGTAGGTGCACCTGAAAAGCCTCTAGACCTGCCAGTGTTCACTTTACTCAAGGGGAGAAAGATGGTAGCTGGGAGTTATGTAGGAGGGTTGAAGGAAACACAAGAAATGATGGATTTTGCTGCTAAGCACAATGTGAAACCTGACATAGAAATTATTCCAGTGGATTATGTGAACACTGCAATGGAACGTCTCCTTAAAGCTGATGTAAAATATCGTTTTGTGATTGATATTGGCAACACATTGAATCCAACATCCTCTTAG 1122 0.4519 MTRNSTKQIQMAGIQHECEHPRKAFGLAARDSSGVLSPFNFSRRETGEKDVRFKVMYCGICHTDASMLKNDWGISVYPLVPGHEIAGVVTEVGSKVEKFKAGDRVGVGYLVGSCRSCQRCSEDLENQCSEQILTSGSKYGDGTMTHGGYSDFMVVDEHFVVHIPDALTLDVAAPLLCAGITVYSSLRHFGLDKAGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEATELLGADSFIVSREQDQMQAAMETLDGIIDTVSAQHPLGPLIGLLRSNGKIVLVGAPEKPLDLPVFTLLKGRKMVAGSYVGGLKETQEMMDFAAKHNVKPDIEIIPVDYVNTAMERLLKADVKYRFVIDIGNTLNPTSS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1010 373 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
Mibi12g1010 373 SUPERFAMILY GroES-like 31 195 IPR011032 -
Mibi12g1010 373 CDD CAD1 25 363 - -
Mibi12g1010 373 PANTHER ALDEHYDE REDUCTASE 16 367 - -
Mibi12g1010 373 FunFam Putative cinnamyl alcohol dehydrogenase 6 335 364 - -
Mibi12g1010 373 SMART PKS_ER_names_mod 34 362 IPR020843 GO:0016491
Mibi12g1010 373 Gene3D - 178 334 - -
Mibi12g1010 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 167 333 IPR036291 -
Mibi12g1010 373 FunFam Cinnamyl alcohol dehydrogenase 178 334 - -
Mibi12g1010 373 Pfam Zinc-binding dehydrogenase 205 328 IPR013149 -
Mibi12g1010 373 Pfam Alcohol dehydrogenase GroES-like domain 49 162 IPR013154 -
Mibi12g1010 373 Gene3D - 28 364 - -
Mibi12g1010 373 FunFam Uncharacterized protein 27 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1010 Mibi-ChrMibi12 24976913 24979331 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1010 22 373 Monolignol Biosynthesis Gene Families AT4G37990 67.330 3.05e-162 457