LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi12g0999	ATGGATACCCGAAACTCCTTTCATAGAGCTTGCTGGGCAAAGATTTGGTTGACAACTGTAATTTCTATGGGATTGGTGATCAAGACGCCTTTCACTCTTTCGGTACTGTCTCATATTGACGTAATCGTTTTGGCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTTAGGAATTCAGATTGGACAAAAAGTTTTCATTGGTTGCATGTCAGGCGCAAAATGGATGAAAAACTGCAGTCAACTCCAAGGCATTTGTACAACATAAAAGCAAAAATCCGTCAGGCAAATCTATCAGAGAAAAATTTCAATTCATGGAGGCCAAACAGATCTTTTCCTGTTGAAACTAACAATACTCCATCTGGCAGTTCATCAATGCAAAACTACGAGCTGCTGAAGGTTCCTAATTTTATTGGGGGGAGATACATAGATTCACAAAGTTGTGGAAATCTTGATGTTACAGATCCTGCAACACAAGAAGTTGTGTCTCAAGTTCCTTTAACTACCTATGAAGAGTTTAAAGCTGCAGTTAAAGCAGCCAAACAAGCTTTTCCTTCATGGAAAAACACTTCAATCACCACTCGCCAGCGTATTCTGTTTAAGTTCCGAGAGCTTATCTGCAGGGACATTGATAAGCTTGCCATGAATATCACCATAGAACAGGGTAAGACTTTAAAGGGTGCTAAAAGAGATGTGCTCCATGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAAATCTGCAAATGGGGGAGTTTGTCCCTAATGCTTGTGATGGAATTGATACATGCTGTATAAGAGAACCCCTTGGAGTTTGTGCTGGAATATGCCCCGTCAACTTTCCAGCAATGATACCCTTGTGGATGTTCCCTATAGCGGTTGCTTGTGGCAACACATTTATTCTCAAACCATGTGAGAAGAATCCAGGGGCTTCAATGATACTTGCTGCATTAGCGATGGAAGCGGGTTTGCCAGATGGTGTATTAAATATTGTTCACGGTACCCATGAGATTGTAAATTACATATGTGATGATGAGGATATAAAAGCTGTATCATTTGTGGGTCCAATTGCGGCTGGAATGCACATATATGCCAGGGCTGCTGCTAGAGGGAAACGCGTCCAGTCCAATACAGGCAGCAAAAATCATGCAGTTGTCATGCCAGATGCTAGCATGGATGCTTCTCTAGGTGCTCTTATTGCTGCTTCCTTTGGTTTGGTGGGAGAGAAATGCATGACTTTAAGCACAGCTATTTTTGTTGGAGGAACATTGCCATGGGAAGAAGAACTTGTGAAACGTGCCAAAGTACTGAAAGTGAATGCAGGAACAGAGCCTAGTGCTGATCTTGGTCCAGTTATTAGCAAAGAGGCAAAGGATCAGATATGTAGATTAATTCAGAGCAGTATTGAAAATGGTGCTAGGCTACTGCTTGATGGAAGACATATTGTGGTACCAGGATATGAGAATGGAAACTTTGTTGGCCCTACAATTTTATGCGATAGTACAATCGACATGGAATGCTACAAGGAGGAAGTTTTTGGACCAGTTCTCCTCTGCATGCAGGCCAATAGCCTAGACGAGGCAATATCAATAATCAACAAAAACAAGTATGGAAATGGAGCTACCATATTTACCACGTCTTGTATAGCGGCTAGGAAGTTCCAGAACGAGGTTGAGGCTAGTCTGGTTGGAATCAATGTTATTGCATCTGTTCCTTTGCCATTTTCTTCCTTCAGTGGTGGGTCAAAGGCATCTTTAGCTGGTGGTCTAAACTTTTGTGGAAAAGCAGGAGTTCAGTTTTATACCCAAATCAAAACAGTGGTTCAACAATGGAATGATTTCCCTGGTCTTGGTGTTTTGCCTTCTGCAAGTCCTGCTGACACGAGTAGAACCCATCAACATGTCTCATCATCAGTGCTTCCACCTGACAGACACTCACCTAGAGAAATTGTGTCACAAATTTTGCCTGCAGAATGTCAGAGTGATTCACCTGCACAAGGGATGCAAATTACCATTCCAGACACTGCTACCGTGATCACAACCGTGTCATCTGCTTCTCCAATCATTGATAAGGGTCTTAGAAGACCTGCCACGACCTTGGTTCTGCCTTCATTTTCTGAGAGGGACATGGAAAATCAGGACATGTCACTGGTTTTATCACCTACATCTCAGAGAGACATGATGAGCCAGGGAGTGTCAGGGAGGTTTTACTTTTCTAAATCATCACACTGGAATGAAGGTTCGTCTGCAACATCTCAAAGGAGGGAAAATATCTCAACCACTTCTGATAGGAGTCATGTACTTACATCTCAAAGGAATGATAATACATCTTCAACATCTCATAGAACTGGTGCTGCCACCACAGCTTTGGAATCAGAGAGGCAATACACGCCCTTGTCCCATAAAGTTGATAGCATCGATCCGACCGATGCTACTGTGCCTTCTACTTCCGGAAGTGTTGTATATGTCCTAGGAGCATCTCATTTAAAAGAGAATCTTGGTCGAACATTTGAAAGACCTGAACACATGCTTACAACTTCTGAGAGGATATACATGACTGCAGTATCTCACAGGAGCTTAAGTCCAACTTCAGAGAGGATGTACATCCCTGCAACATCTCATAGAACTGAAAGAATTAGCGCACCTTCCCAGTTTGGCGATACTTTGCCTCCAATGGTACAGAATATGCCGGCAAGTTCAGAGAGGTTACATATACCAGGTACGTCTCAAAGTGTATATAGTCGAGACTTGATAATTTCAATAGATGAACTCTCCAGCCAATCTGCTGCTCTTACTTTACCAACATCTCAGAGGATATGA	2817	0.4249	MDTRNSFHRACWAKIWLTTVISMGLVIKTPFTLSVLSHIDVIVLAKKKKKKKKKKFRNSDWTKSFHWLHVRRKMDEKLQSTPRHLYNIKAKIRQANLSEKNFNSWRPNRSFPVETNNTPSGSSSMQNYELLKVPNFIGGRYIDSQSCGNLDVTDPATQEVVSQVPLTTYEEFKAAVKAAKQAFPSWKNTSITTRQRILFKFRELICRDIDKLAMNITIEQGKTLKGAKRDVLHGLEVVEHACGMANLQMGEFVPNACDGIDTCCIREPLGVCAGICPVNFPAMIPLWMFPIAVACGNTFILKPCEKNPGASMILAALAMEAGLPDGVLNIVHGTHEIVNYICDDEDIKAVSFVGPIAAGMHIYARAAARGKRVQSNTGSKNHAVVMPDASMDASLGALIAASFGLVGEKCMTLSTAIFVGGTLPWEEELVKRAKVLKVNAGTEPSADLGPVISKEAKDQICRLIQSSIENGARLLLDGRHIVVPGYENGNFVGPTILCDSTIDMECYKEEVFGPVLLCMQANSLDEAISIINKNKYGNGATIFTTSCIAARKFQNEVEASLVGINVIASVPLPFSSFSGGSKASLAGGLNFCGKAGVQFYTQIKTVVQQWNDFPGLGVLPSASPADTSRTHQHVSSSVLPPDRHSPREIVSQILPAECQSDSPAQGMQITIPDTATVITTVSSASPIIDKGLRRPATTLVLPSFSERDMENQDMSLVLSPTSQRDMMSQGVSGRFYFSKSSHWNEGSSATSQRRENISTTSDRSHVLTSQRNDNTSSTSHRTGAATTALESERQYTPLSHKVDSIDPTDATVPSTSGSVVYVLGASHLKENLGRTFERPEHMLTTSERIYMTAVSHRSLSPTSERMYIPATSHRTERISAPSQFGDTLPPMVQNMPASSERLHIPGTSQSVYSRDLIISIDELSSQSAALTLPTSQRI	938

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi12g0999	938	MobiDBLite	consensus disorder prediction	742	794	-	-
	Mibi12g0999	938	MobiDBLite	consensus disorder prediction	742	811	-	-
	Mibi12g0999	938	TIGRFAM	MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating)	134	610	IPR010061	GO:0004491
	Mibi12g0999	938	Pfam	Aldehyde dehydrogenase family	141	606	IPR015590	GO:0016491
	Mibi12g0999	938	CDD	ALDH_F6_MMSDH	133	610	IPR010061	GO:0004491
	Mibi12g0999	938	MobiDBLite	consensus disorder prediction	624	639	-	-
	Mibi12g0999	938	PANTHER	MALONATE-SEMIALDEHYDE DEHYDROGENASE	61	933	IPR010061	GO:0004491
	Mibi12g0999	938	SUPERFAMILY	ALDH-like	125	612	IPR016161	GO:0016491
	Mibi12g0999	938	FunFam	Methylmalonate-semialdehyde dehydrogenase (Acylating)	378	578	-	-
	Mibi12g0999	938	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 2	378	579	IPR016163	GO:0016620
	Mibi12g0999	938	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 1	152	587	IPR016162	GO:0016491
	Mibi12g0999	938	MobiDBLite	consensus disorder prediction	624	643	-	-
	Mibi12g0999	938	FunFam	Methylmalonate-semialdehyde dehydrogenase [acylating]	137	384	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi12g0999	Mibi-ChrMibi12	24843700	24856620	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi12g0999	132	594	Aldehyde Dehydrogenase Gene Family	AT2G14170	72.354	0.0	699