Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0986 ATGGCTCGAGCTACAAACTGGCTGTCTTTTTCTTTGTCTCCCATGGAAATGTTGAGATCCTCTTCCGATTCTCATAATGATCAGTTCGTTCAATACGACGACAACAACAACAACCTCTCTGCTAACACCAATTCCTCTCACTACTTCCTCGATAATTTCTATGCCAATGGTTGGGCGAATCTGAAGTCACAAGCTGATTACTACGGCCAAGTAGAAGCAAACCAAAGTGGAGAAGACAGCTTGAGGGGCCCACTACAGAATCATAACGACGGAGCGCCGCCGCCGCCGAAGCTGGAAGATTTCCTCGGATACTCCGACAGTCAAACGGAGACACAAGATTCCTCGTTGACTCAGATATACGATGGCGCCGGCGGTTACTTCGGTGAGCCGCAAGATCTGAAGGTGATTGCTGGGTTTCAAGCTTTTTCTGCGAACTCTGGTTCTGAGGTGGAAGATTCTGCGTCGTTTGCGAAGAATGGTCATCATCATCATCAGACGGCGGTTGAGTCGGCCGGCGGGAATGACGTGGCATTCTCCTCCGGCGGCGGCGGAGGTTTGTCACTCGCCGTCGCGCAAGGCCGTGAGGGAGGTGTTGTTACGGTGGAGTCGGATAGTTCGAAGAAAGTTGGTGATACTTTTGGTCAGCGAACTTCAATCTATAGAGGCGTTACTAGACACAGATGGACGGGAAGATATGAAGCGCATCTATGGGATAATAGTTGCAGAAGAGAGGGTCAGGCTAGGAAAGGACGTCAAGGTGGATATGACAAAGAAGACAAGGCTGCGAGGGCTTATGATTTGGCTGCTCTAAAGTATTGGGGTCCGACTGCTACCACCAACTTTCCTGTTGCAAATTACGCAAAGGAATTGGAGGAGATGAAACTTGTAACAAAGCAAGAATTCATTGCTTCACTGAGAAGGAAAAGTAGCGGATTCTCTAGAGGAGCTTCTATTTACAGGGGCGTCACAAGGCATCATCAGCAAGGTCGATGGCAAGCAAGAATCGGTCGTGTTGCGGGAAACAAAGATCTATACCTCGGAACATTTGCCACTGAAGAGGAAGCAGCTGAAGCATATGATATTGCAGCCATTAAATTCAGAGGTGCAGGTGCAGTGACAAACTTTGAGATGAACAGATATGATGTGGAAGCTATTATGAAGAGTACTCTTCCTGTTGGTGGATCAGCCAAACGAGCAAAACATTCCCCAGAAGTATCATCTGAACATAATCCTCTTCCTACTAACATTATCCATCACCAACAACCTCAATATCATCATCATCCAAATGCCATTAATACCAACGTTGGAACTATCAGCTTCACTCCCATTCAACCTGCACTTTCTTCATCTATCCCTTGTGCCATTCCCTATGATTCTGCAGCTGCAGCTTCACATCATTACCACCCAAATCTCTTTCACCATTTTTATCCTTCTAGCGGCTCTGCCACCGTGGATTCCTCTGTGACTGCTTCTCCGATGACCGCGCTGCCTCCTTCTGCTGCTGCTGAGTTCTTTCTGTGGCCTCATCAGCCATGTTGA 1539 0.4776 MARATNWLSFSLSPMEMLRSSSDSHNDQFVQYDDNNNNLSANTNSSHYFLDNFYANGWANLKSQADYYGQVEANQSGEDSLRGPLQNHNDGAPPPPKLEDFLGYSDSQTETQDSSLTQIYDGAGGYFGEPQDLKVIAGFQAFSANSGSEVEDSASFAKNGHHHHQTAVESAGGNDVAFSSGGGGGLSLAVAQGREGGVVTVESDSSKKVGDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWGPTATTNFPVANYAKELEEMKLVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGAGAVTNFEMNRYDVEAIMKSTLPVGGSAKRAKHSPEVSSEHNPLPTNIIHHQQPQYHHHPNAINTNVGTISFTPIQPALSSSIPCAIPYDSAAAASHHYHPNLFHHFYPSSGSATVDSSVTASPMTALPPSAAAEFFLWPHQPC 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0986 512 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 91 419 - -
Mibi12g0986 512 Pfam AP2 domain 219 274 IPR001471 GO:0003700|GO:0006355
Mibi12g0986 512 Pfam AP2 domain 318 368 IPR001471 GO:0003700|GO:0006355
Mibi12g0986 512 FunFam AP2-like ethylene-responsive transcription factor 317 378 - -
Mibi12g0986 512 SUPERFAMILY DNA-binding domain 218 283 IPR016177 GO:0003677
Mibi12g0986 512 ProSiteProfiles AP2/ERF domain profile. 318 376 IPR001471 GO:0003700|GO:0006355
Mibi12g0986 512 SMART rav1_2 318 382 IPR001471 GO:0003700|GO:0006355
Mibi12g0986 512 SMART rav1_2 219 288 IPR001471 GO:0003700|GO:0006355
Mibi12g0986 512 MobiDBLite consensus disorder prediction 75 110 - -
Mibi12g0986 512 CDD AP2 317 376 IPR001471 GO:0003700|GO:0006355
Mibi12g0986 512 SUPERFAMILY DNA-binding domain 317 377 IPR016177 GO:0003677
Mibi12g0986 512 FunFam AP2-like ethylene-responsive transcription factor ANT 218 284 - -
Mibi12g0986 512 PRINTS Ethylene responsive element binding protein signature 220 231 IPR001471 GO:0003700|GO:0006355
Mibi12g0986 512 PRINTS Ethylene responsive element binding protein signature 358 378 IPR001471 GO:0003700|GO:0006355
Mibi12g0986 512 CDD AP2 218 284 IPR001471 GO:0003700|GO:0006355
Mibi12g0986 512 ProSiteProfiles AP2/ERF domain profile. 219 282 IPR001471 GO:0003700|GO:0006355
Mibi12g0986 512 MobiDBLite consensus disorder prediction 156 176 - -
Mibi12g0986 512 Gene3D AP2/ERF domain 219 284 IPR036955 GO:0003700|GO:0006355
Mibi12g0986 512 Gene3D AP2/ERF domain 318 378 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0986 Mibi-ChrMibi12 24589031 24593500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0986 96 510 AP2-EREBP Transcription Factor Family AT5G10510 55.200 6.28e-144 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi12g0986 AP2 1.2e-08 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g0986 12 24589031 24593500 Mibi10g1453 10 35273070 35277139 CCT