Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0979 ATGGCTCTTCCTGGTTCTCTTCAGTTGTCCCGTGGGTTGGGACCTTGTAGGAACCAGAATTACAATAAACACCCTCTGCTCCTGAAACAAGAATGTTGGCGACTTAGACATTCTTGCAATATAAGCAGGCCAATTCATGCCTTATCTCTCAAATCCCAGTCTTTCAAGTGTCATTCTTTTCTAGCACCTGGTCGACCAAGTGAGTTACCTGTTGTTAAGGTGGCTGTCACAGCACTAAAAAGGTCTTGTAATGTTGTACAAGGTAATCCTGTCATAGCAAAGTTAATTCCAGCACTTGGTGTAATCACGTTTGCTCTATGGGGTGTCGGCCCATTACTATATCTAACAAGAAAACTGATCCTTCAGAGGGATAGCAATTGGAAGAAAAGCAGCACAAATTATATAGTAACTTCTTATGTTCGGCCAATAATGTTATGGATTGGTGCTATACTTATGTGCAGAGCTTTGGAGTCAGTAGTTCTACCCACAGAAGCTGGCCAGATTGTTAAGGAAAGGCTTTTGAATTTTGTAAGATCATTGTCAACCGTGCTTTCATTCGCATATTGTTTATCAAGTGTGATTCAACAAGCACAGAGATTTTTTGTTCAGAGTGCTGATGCCAGTGAGGCAAGAAATATGGGATTCCAATTTGCGGGCAATGCTGTGTACTCTGCAGTATGGATTGCTGCATTTTCATTGTTCATGGAATTGCTGGGTTTCTCTACTCAGAAATGGCTTACTGCCGGAGGTCTCGGGACAGTTTTGCTTACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCCAGCTTGATGATTCACGCAACTAGACCTTTTGTGGAGAACGAATGGATTCAAACAAAAATTGAAGGATATGAAGTCTCTGGTACTGTAGAGCGTGTCGGCTGGTGGTCGCCTACAATCATAAGAGGTGAAGATCGTGAGGCTGTTCATATTCCAAACCACAAATTTACAATGAGTGTTGTGAGAAACCTTACTCAGAAAACACATTGGAGGATCAAAACCCACTTATGCATCAGTCATTTGGATGTCAGCAAGATTAATAATATTGTTGCTGACATGCGGAAAGTCTTGGCAAAAAATCCTCAGGTGGAGCAGCGGCTGCTGCACCGGAGAGTGTTTCTGGAGGATGTAAATACTGAAAATCAATCTCTTATGATACTGGTGTCTTGTTTTGTCAAGACTTCGCGTCATGAAGAGTATTTTCGTGTTAAGGAAGTTATACTATTAGATCTTCTTAGAGTCATTGGTCATCATGGGGCTCGCCTTGCAACACCTTTTCGTACTCTCCAAAGTAGATATAGTGATGATGACTTGGAGAACATACCCTATTCAGATTCTTCTGTTGGTGGTGCTAGAACAGCACGTAACCGTCCATTATTATTGATTGAGCCACCTTACAAAATCAACTCTGAAGACAAAACAAGAAGCCCCAAAACACAAACCAAACAATCTGCAAAGACTGATGGCAAGTCTGGATCAACAGTAGTTCCAGATTCTAATGTTGGAGAAACTCCTTCAAACTCCAAGTCAGGTTCCAAAGCTGTGATGCCTTCCTCTGATGTGAATGGAAAATCCGAAAATGCCACATCATCGGTTGTCCATCCAGCTGTACTTGAAAATGATCCACCGAAACCTGATTCAAATACCAAGGGAAATATTGGGTTGCAAGATATCTCTGCTTCCAATTCCAAAGCAAATTTAACCAAGGACCTGAACCATAAGCAGAAAGTTGACCATGACAATATAATGTCATCTTCAGCTTCAAGTAATGCTGACACAACACTTGTGCATCCTTTGGATAAACCATTAAAACAAGACGAAAGGAAACCAGCTGAACAGCCTGCTACACCCAGGCATGATGTTGAAGAGAATATGGTGCTTGGTGTTGCATTGGAGGGATCAAAGAGAACCCTTCCTATTGATTATTGA 1953 0.4158 MALPGSLQLSRGLGPCRNQNYNKHPLLLKQECWRLRHSCNISRPIHALSLKSQSFKCHSFLAPGRPSELPVVKVAVTALKRSCNVVQGNPVIAKLIPALGVITFALWGVGPLLYLTRKLILQRDSNWKKSSTNYIVTSYVRPIMLWIGAILMCRALESVVLPTEAGQIVKERLLNFVRSLSTVLSFAYCLSSVIQQAQRFFVQSADASEARNMGFQFAGNAVYSAVWIAAFSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSLMIHATRPFVENEWIQTKIEGYEVSGTVERVGWWSPTIIRGEDREAVHIPNHKFTMSVVRNLTQKTHWRIKTHLCISHLDVSKINNIVADMRKVLAKNPQVEQRLLHRRVFLEDVNTENQSLMILVSCFVKTSRHEEYFRVKEVILLDLLRVIGHHGARLATPFRTLQSRYSDDDLENIPYSDSSVGGARTARNRPLLLIEPPYKINSEDKTRSPKTQTKQSAKTDGKSGSTVVPDSNVGETPSNSKSGSKAVMPSSDVNGKSENATSSVVHPAVLENDPPKPDSNTKGNIGLQDISASNSKANLTKDLNHKQKVDHDNIMSSSASSNADTTLVHPLDKPLKQDERKPAEQPATPRHDVEENMVLGVALEGSKRTLPIDY 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0979 650 MobiDBLite consensus disorder prediction 607 627 - -
Mibi12g0979 650 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 11 649 IPR045042 -
Mibi12g0979 650 MobiDBLite consensus disorder prediction 488 542 - -
Mibi12g0979 650 MobiDBLite consensus disorder prediction 591 633 - -
Mibi12g0979 650 Pfam Mechanosensitive ion channel 221 429 IPR006685 GO:0016020|GO:0055085
Mibi12g0979 650 Gene3D - 279 334 IPR023408 -
Mibi12g0979 650 Gene3D - 175 277 - -
Mibi12g0979 650 SUPERFAMILY Sm-like ribonucleoproteins 263 333 IPR010920 -
Mibi12g0979 650 MobiDBLite consensus disorder prediction 553 569 - -
Mibi12g0979 650 MobiDBLite consensus disorder prediction 446 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0979 Mibi-ChrMibi12 24486888 24492306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0979 9 649 Mechanosensitive Ion Channel Family AT5G10490 54.683 0.0 673