Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0953 ATGGATTTTGATGAGCAAGAAGATGAGGAGATGGGTATGGGCCCCACAGCGAGTTACGACTCGCTGGGTAACCCAAACCAAGAAACCATGGTGAAGAATCAACTTGTGGTTCAGGCCAACAACAAGAAGAAAGCAAAGTATAGAGAGTGCTTGAAAAATCACGCGGTGGCCATCGGCGGCCACGCGCTCGACGGCTGCGGAGAGTTCCTACCCGCCGGAGCCGACGGCACCATCGACGCCCTCAAATGCGCCGCCTGTAACTGCCACCGCAACTTCCACCGCAAAGAAACCGACCCCACCTCCGGCATGGCGGCGATGGAGCCGTATTTGTTGACCAACCACCCCCACTTCCACCACCATCAACCGCCGCCGCCGCCGCCACGTCATCACCAATTCTCGGCGTATTACAGGACGGCGCCGGCGGCGGGGTACCTGCACGTGGGGAGGGGCCCACCACCATCGGCGGCGCTGGCGCTGCCGTCGACATCTGGCGCCGGGTGTGGGGCCCACAACAGCATAGGGGAGGATCATGAGGAGGATGTGAGTGGGAATGGGAATAATAATGGGGATGATGGTGGGGTGATGAGGAAGAGGTATAGGACGAAGTTCACGCAGGAACAGAAGGAGGGGATGTTGGGGTTGGCGGAGAGGCTTGGGTGGAGGATTCAGAAGCATGATGAGAGTGTGGTCCAACAATTCTGTGATGAGATGGGTGTCAGGCGTCATGTTCTCAAGGTTTGGATGCATAACAACAAGCACACTCTTGGTAAGAAGCCCTAG 780 0.5769 MDFDEQEDEEMGMGPTASYDSLGNPNQETMVKNQLVVQANNKKKAKYRECLKNHAVAIGGHALDGCGEFLPAGADGTIDALKCAACNCHRNFHRKETDPTSGMAAMEPYLLTNHPHFHHHQPPPPPPRHHQFSAYYRTAPAAGYLHVGRGPPPSAALALPSTSGAGCGAHNSIGEDHEEDVSGNGNNNGDDGGVMRKRYRTKFTQEQKEGMLGLAERLGWRIQKHDESVVQQFCDEMGVRRHVLKVWMHNNKHTLGKKP 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0953 259 Gene3D - 181 256 - -
Mibi12g0953 259 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 47 96 IPR006456 -
Mibi12g0953 259 FunFam Zinc-finger homeodomain protein 2 184 257 - -
Mibi12g0953 259 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 46 96 IPR006456 -
Mibi12g0953 259 MobiDBLite consensus disorder prediction 175 195 - -
Mibi12g0953 259 Pfam ZF-HD protein dimerisation region 45 97 IPR006456 -
Mibi12g0953 259 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 33 255 - -
Mibi12g0953 259 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 196 252 IPR006455 -
Mibi12g0953 259 SUPERFAMILY Homeodomain-like 181 257 IPR009057 -
Mibi12g0953 259 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0953 Mibi-ChrMibi12 24162093 24162872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0953 1 255 ZF-HD Transcription Factor Family AT4G24660 47.860 4.82e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi12g0953 ZF-HD_dimer 6.4e-29 No_clan