Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0944 ATGGAAGAAGCCTTTAGAAGTCTCAACGGCCACAAGAAGTTCACCTCCGCCGCCACCAAGAGGGCCTTGAAAGAAAACAACGGCGGTGGAGGCGTGAGGTACCGTGGAGTGAGGCGTAGGCCGTGGGGCCGTTACGCCGCCGAGATAAGGGACCCACTAACCAAAGAACGACGGTGGCTCGGAACGTTCGACACGGCGGAGGAAGCCGCCTGTGCCTACGACTGCGCCGCCAGAGCCATGCGTGGCCTAAAAGCTCGCACCAACTTCCTCTACCCAACTTCCTCTCTTCCTTATAATAATCTCTTACCTTCTAAATCTTTCAAATTCTCAAAACATCCCCAAACGACGTCGTCCTTTAACAAAAACCACCACGTCCACGTGGGAGCTTCTCATTGGTCCAACCCTCGTCCCTCCAACATGATTATGCACCCTCATGTTCTCAACCCTTCCTCTTCCTCCATGTTTGTACCTTCCTCCTCTTCGTCTTCGTTCACTACTTGTCCTACGTGTACTTGTCACCGAGGTTGTTGTTTGATGACTTCTTCTTCTTCCGGTGCTACTGATAATACTACTGTTAGTGGTAGTGGCACGTGTGTGACTACACCCCATCATGATGGGGTTATGACTAAGAGTGATGGTTCTGAAGCTGTTGCTGACTTTGGGTTCTTTCCTAGAGAAGCTTCTGATTCGGGGTTGTTGGAGGAGATAGTCTATAAGTTTATGTTAAATTCCAAGCCCAAGAAATTTGAGGGTGGTCACTCGGAGTTACCGACTGAGATTCAGACACAGGTTCACCAGTCTCAATCAGCTACTACTGATGATACTATGTTTGTTTCTGGTTCTCAATGTTATTATGAGACCAAGAAAGAGGGTTCTGGTGTTTATAATAATTTGGATGACTATCAAGGTTTTGTTCCCATGCAACAACAGTTTCATGAGCAGGGTGTTATGCATTTAGGCAACGGTGGTCAGATGATGATGAACCAGCAGCATGCAGATTTCTCTATCACGCAAGATCTTGTTCGTTATCAAGAGATTCTCAATGCCTTCTCAGCCAGCGTCCATAATGCTTAA 1074 0.4758 MEEAFRSLNGHKKFTSAATKRALKENNGGGGVRYRGVRRRPWGRYAAEIRDPLTKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFLYPTSSLPYNNLLPSKSFKFSKHPQTTSSFNKNHHVHVGASHWSNPRPSNMIMHPHVLNPSSSSMFVPSSSSSSFTTCPTCTCHRGCCLMTSSSSGATDNTTVSGSGTCVTTPHHDGVMTKSDGSEAVADFGFFPREASDSGLLEEIVYKFMLNSKPKKFEGGHSELPTEIQTQVHQSQSATTDDTMFVSGSQCYYETKKEGSGVYNNLDDYQGFVPMQQQFHEQGVMHLGNGGQMMMNQQHADFSITQDLVRYQEILNAFSASVHNA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0944 357 CDD AP2 41 89 IPR001471 GO:0003700|GO:0006355
Mibi12g0944 357 FunFam Ethylene-responsive transcription factor 2 33 91 - -
Mibi12g0944 357 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Mibi12g0944 357 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Mibi12g0944 357 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 219 - -
Mibi12g0944 357 Gene3D AP2/ERF domain 32 91 IPR036955 GO:0003700|GO:0006355
Mibi12g0944 357 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Mibi12g0944 357 SUPERFAMILY DNA-binding domain 33 90 IPR016177 GO:0003677
Mibi12g0944 357 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Mibi12g0944 357 Pfam AP2 domain 33 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0944 Mibi-ChrMibi12 23961679 23962752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0944 28 347 AP2-EREBP Transcription Factor Family AT1G12980 35.385 6.83e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi12g0944 AP2 8e-12 CL0081