Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0928 ATGACACGCTTTGTTATTATGTGCTTTATTGTATTAAGCCTCGTCGTGATGGTTCCTTCAAGCGCACAAGAGCCTGGAAACGATGAGAAAAGGCCAAGGGGAGGAATAATAATTGCCAAAACCAACCACACACTTAAGGAAAATTTCTATAGGAAACGTTGCCCCTTTGCTGAGAGAATTGTGGCTGATCATGTTAAGGATCTTTTCGTCAATGACCCTATCGTTGTTGCCGCCTTCATTCGCCTTCTTTTCCATGACTGCTTCGTTAACGGATGTGATGCGTCGCTTTTGTTAGACACAACGGGGAGTGCAGCAAATATAGAGAAAACTTCTAAAGCCAACGGAGAGCTCTTACAAGGTGCAACATACATAGATGACATCAAAATGAAGTTAGAAGAGACCTGCCCACAAACAGTATCATGCGCCGACATACTCTCATTCGCCGCCATGGAAGCGATGGCGCTCCTCGGCGGGCCCCGCCGCCCGAACCTCGGTGGCCGGCGTGACGGCACGGTGTCGCTTGCATCACAAGTAGACATAGACCACAACTTGCCCCTCCCACAATGGAACATGGACCAAATGATACAACTCTTCCAAAGGAAAGGGTTCAGTGTGGAGGACCTAGTGGTCCTGAGTGGGGCCCACTCAATAGGTGTGGCCCACTGTAGTGTGTTTAAGGACAGGTTGGTTGGATACGAAGACGGCGGTAACATGTCCAAGCAACTAAAAACGGAGCTCGCCGGAAAGTGTAAGCCGCCGGGGACGGCGGCGGCGAGGGAGAATCCGACGGTGGGATTTGATGAGACACCGACGGTGCTTGATAATTTGTTCTTTAGGAATTTGGTGGGAAAAAAGATAGCGTTGTTGAAATCTGATCAGAATTTGGTCAATGATCCGAGGACTTTTGATTATGTGCATAATTTTGCAGAGGATGAAGAGTTGTTTAAGAATAAGTTTGCTGATGCTTTGGTTCGATTGTCTTCTTTAGATGTGCTTCTAGGCAAGAGGAAAGGAGAGATCAGAAGGACTTGTAGGTCAACTAATTAA 1047 0.4737 MTRFVIMCFIVLSLVVMVPSSAQEPGNDEKRPRGGIIIAKTNHTLKENFYRKRCPFAERIVADHVKDLFVNDPIVVAAFIRLLFHDCFVNGCDASLLLDTTGSAANIEKTSKANGELLQGATYIDDIKMKLEETCPQTVSCADILSFAAMEAMALLGGPRRPNLGGRRDGTVSLASQVDIDHNLPLPQWNMDQMIQLFQRKGFSVEDLVVLSGAHSIGVAHCSVFKDRLVGYEDGGNMSKQLKTELAGKCKPPGTAAARENPTVGFDETPTVLDNLFFRNLVGKKIALLKSDQNLVNDPRTFDYVHNFAEDEELFKNKFADALVRLSSLDVLLGKRKGEIRRTCRSTN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0928 348 SUPERFAMILY Heme-dependent peroxidases 45 348 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 FunFam Peroxidase 185 326 - -
Mibi12g0928 348 Pfam Peroxidase 62 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 207 217 IPR019793 -
Mibi12g0928 348 PANTHER - 12 348 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 Gene3D - 48 348 - -
Mibi12g0928 348 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601
Mibi12g0928 348 ProSiteProfiles Plant heme peroxidase family profile. 44 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 Gene3D Peroxidase, domain 2 185 326 - -
Mibi12g0928 348 CDD secretory_peroxidase 45 347 IPR033905 GO:0004601|GO:0042744
Mibi12g0928 348 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Plant peroxidase signature 281 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Plant peroxidase signature 321 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mibi12g0928 348 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0928 Mibi-ChrMibi12 23656827 23659368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0928 37 348 Peroxidase AT5G51890 38.217 2.62e-69 218