Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0926 ATGGCTTTCATTAACCTTCTTATTTCCCTTCTGCTCCTACTTCTAGCAAACTCTTTCAATATGATCATCAAGATCCAAGCATTTGACAAAGAACCCATGAATTGTTCTTCATCAACTATCTTGCAATGCAATGCCTCCTTATATCATGTCACCAATAATGATTTCACCTACAAAAAAGACATCGCTTCGCGCTACTCAGTCGACGTGTCCCATTTGAAACCTATAAAGCGTCCCAACAATAATAATGAACACGAAGATTACCTTGTAACTGTTCCTTGTACTTGTCTAACTACCAAAGACCTTAGTGGTTACTTTTATGAGACAAACTACACAGTGGAGCTTGATGACACAGTGCAGAATATTTCAGATTTGGTTTATAGTGGCCAAACATGGATTCTTGGGAATCATAGCCTTTTGAACATAAGTGAGACTTTAACCATATATCTTCTCTGTGGGTGTTCTACAAGTAGTAGTGATGAGCCTCAGATTTTTGTGACATATACGGTGCAGAAGGATGAATCTCTCTTCACAATTGCTAGTCTTCTGAATTCTACCGTGGATAGCATGAAGAACTTTAATGGGATTTTAAATTCAAACCCGTCTTTTTTGGGTGTGGGGTGGGTTCTATTTATTCCCAGTTACTTGAATGGTATTCCATTTCTCAATGATAGTTATGGTTCTAATAAAGGGACTACCAAGTTTAAATTGGTCGTTGGCATACTAGCAGGTTTGGTGTTGCTTTTGTTGCCCACAGCAATTATACTCATTGTTAGAAGAAAAAGAAGCAAAGAAGGACCTAGAAAAGCAGTTTCCAATAGAAATCCTTCAGATCCCCTTCATAAAAAAATTGTAAAAGATGAAACACCATTTGAATCAGAAAAACTAGAAATATTTAGTCTTGAGGAGATTGAAGAGGCTACCGATTACTTTGACGAAACCAGAAAAATTGGAGTAGGTGGATATGGAAGTGTGTATTTTGGAGTCATGGGCGAGAAGGAGGTTGCGATAAAGAAGATGAGGTCCAATAAATCAAAAGAGTTCTTTGTAGAACTTAAGATCTTATGTAAGATCCATCATATCAACATTGTAGAGCTATTGGGATATGCCAGTGGAGAAGACCACCTCTTCTTGGTGTATGAATATGTTGCAAATGGATCTCTCAGTGACCATCTTCATGATCCAGTACTAAGAGGTTATCAGCCTCTTTCTTGGAATGCTAGAGTTCAGATTGCTCTGGATGCTGGAAAAGGTCTTGAATACATACATGATTACACAAAAATGCGATATGTTCATCGTGATGTAAAGACTAGTAATATCCTTCTCGACGAGATGCACAAAGCAAAGGTAGCAGATTTTGGACTTGCAAAGCTGGTAGAACGAACAAATGATGAAGATACTAACATAGCAACAAGGCTTGTTGGAACACCTGGCTACCTTCCACCAGAATCTGTGAAGGAGTTTAAGACGACTCCAAAAACTGATGTGTTTGCATTTGGAGTAGTTCTGTCAGAGCTGGTAACAGGGAAACGCGCCTTGTTTCGTGACAGCCAAGAGGCCAACAAAATGAAATCCCTTATTACAGTTGTCAATAAAATATTCGAAGACAATGACCCTGAGGCTGCTTTAGAAAATGTCATAGATCGGAATCTCCAAGGTTGCTACCCTCTCGAGGATGTATTCAAGATGGTAGAGTTAGCTGAGAGATGTTTACGGGAAGATCCATTGGAGAGGCCAGAAATGAGGCAGGTGGTTGAAGCACTGTCACAGCTTGTGATGTCGTCCATGGATTGGGAAGCTTCACTTAGAGAGAAAAGTCAGGTCTTCAACGTCGTTGTATGTAAAGCAAGATGA 1851 0.3944 MAFINLLISLLLLLLANSFNMIIKIQAFDKEPMNCSSSTILQCNASLYHVTNNDFTYKKDIASRYSVDVSHLKPIKRPNNNNEHEDYLVTVPCTCLTTKDLSGYFYETNYTVELDDTVQNISDLVYSGQTWILGNHSLLNISETLTIYLLCGCSTSSSDEPQIFVTYTVQKDESLFTIASLLNSTVDSMKNFNGILNSNPSFLGVGWVLFIPSYLNGIPFLNDSYGSNKGTTKFKLVVGILAGLVLLLLPTAIILIVRRKRSKEGPRKAVSNRNPSDPLHKKIVKDETPFESEKLEIFSLEEIEEATDYFDETRKIGVGGYGSVYFGVMGEKEVAIKKMRSNKSKEFFVELKILCKIHHINIVELLGYASGEDHLFLVYEYVANGSLSDHLHDPVLRGYQPLSWNARVQIALDAGKGLEYIHDYTKMRYVHRDVKTSNILLDEMHKAKVADFGLAKLVERTNDEDTNIATRLVGTPGYLPPESVKEFKTTPKTDVFAFGVVLSELVTGKRALFRDSQEANKMKSLITVVNKIFEDNDPEAALENVIDRNLQGCYPLEDVFKMVELAERCLREDPLERPEMRQVVEALSQLVMSSMDWEASLREKSQVFNVVVCKAR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0926 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Mibi12g0926 616 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Mibi12g0926 616 Gene3D Transferase(Phosphotransferase) domain 1 382 611 - -
Mibi12g0926 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 26 609 IPR044812 GO:0019199|GO:0045087
Mibi12g0926 616 SUPERFAMILY LysM domain 165 212 IPR036779 -
Mibi12g0926 616 Pfam Protein kinase domain 311 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0926 616 Gene3D Phosphorylase Kinase; domain 1 280 381 - -
Mibi12g0926 616 ProSiteProfiles LysM domain profile. 165 211 IPR018392 -
Mibi12g0926 616 CDD LysM 165 211 IPR018392 -
Mibi12g0926 616 Pfam LysM domain 167 212 IPR018392 -
Mibi12g0926 616 Gene3D LysM domain 155 216 IPR036779 -
Mibi12g0926 616 SMART LysM_2 166 212 IPR018392 -
Mibi12g0926 616 SUPERFAMILY Protein kinase-like (PK-like) 293 587 IPR011009 -
Mibi12g0926 616 FunFam PTI1-like tyrosine-protein kinase 3 382 601 - -
Mibi12g0926 616 SMART serkin_6 310 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0926 616 ProSiteProfiles Protein kinase domain profile. 310 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0926 Mibi-ChrMibi12 23627738 23636319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0926 290 612 Receptor kinase-like Gene Family AT1G51940 50.152 1.42e-108 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mibi12g0926 Pkinase 2e-50 CL0016