Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0866 ATGTGCTGCAAATTGCTCCTGCATTACACAAACACTGATAGACCCCTATTAGGAGGAGACACAGAAATGGCAGGCTTGGAGGTAGGAGCAGTGGAGGGATTCAGATCCTTGATCGACACTAAAGCTTGGGACTATGTTGTAGTATGGAAGTATGGCGATGATCCAACAAGATTTATCGAGTGGTTGGGGTGTTGTTGTGTTGGGGGATGCAAGGGAAGCAAGCACGAAGAGGAAAAAGAGGAAGAACATAGATTGATAACTAAATGTAGGGATAGTCACTTTCAGCATACAGTGAGAACCAAAGCTTGTGAGGCTCTTGCCTTGCTTCCTTATACAATGCCACTTTATTCTGGTGTTCATGGTGACGTGGCAATATCAAAACAACCTCAATGGCTTACCCAGGATTCAAAAGGAACTCAAGTTTTGATCCCTATCACTGTTGGTATTGTAGAACTCTTCTCAGCAGAGATTATACCAAGAGATTCAAGGATCATAGAGTTGATAACTGCGCATTGTTGTGTCTCTATGAAAAATGGAGCCATCTCTGAACATCCACCATTGTTAGATTCAAGCTCTCAAGAAAGCTTGATTTCTAGCATACATGAATCTGCAGTAAAGAAGTGCAGCTCTCATCCAAGCATTGAAGGATCCTCCAGTGGATCTAATCCTTCAGGTGAAACTTCAAAAGAGCATAAAAGAGGTATGGTTTTCCAGTGTGGCACTCTGGAAGAAGATAAACCAGAGTTGGTCAAGAGACTTCAAAGAGAAGGCTATACATCTAAAAATCTAGTCACAGAGAGGAACAGGAGGAATAAGATCAAAGATGGGCTTTACACTCTACGAGCTTTGGTCCCAAAGATAACCAAGATGGATAGGGCAGCCATTGTTGGAGATGCCATTGATTATATAAAGGAACTGCAGGAACAAGAAAAAGGACTTAGAGATGAGATGACAGCTTTGGAAGAAGACTATGAAAAGAACAAACCACAGTGGAAACGGCCCATATTGAAGGAACAAGGAGGAACCAGAAGAATTCAAAGCTCATCTGATTCCACAAGAAGGACCCAAATAGAGGTTGAAGTGAACCAGATTGGGAAAATAGAGTTTCTTGTAAAGATACATAGCGAGCGGAAGAGAGGAGGGTTTGCAAGATTGATGGAGACTATTCATCTGTTTGGTCTGCAAGTAACTGACGCTAATGTGAACACATTTGGTGACCAAGTCATGAATGTTCTGACTGTTAAGGCAAAGAAGCTTGATTTGCACCCAGACATATTAAGAGAGTATTTAACCAAGCAAGCTGGTTCTCACGAAAGAGTTGGTGATGAGTTCAAGAAAGCTTAG 1344 0.4189 MCCKLLLHYTNTDRPLLGGDTEMAGLEVGAVEGFRSLIDTKAWDYVVVWKYGDDPTRFIEWLGCCCVGGCKGSKHEEEKEEEHRLITKCRDSHFQHTVRTKACEALALLPYTMPLYSGVHGDVAISKQPQWLTQDSKGTQVLIPITVGIVELFSAEIIPRDSRIIELITAHCCVSMKNGAISEHPPLLDSSSQESLISSIHESAVKKCSSHPSIEGSSSGSNPSGETSKEHKRGMVFQCGTLEEDKPELVKRLQREGYTSKNLVTERNRRNKIKDGLYTLRALVPKITKMDRAAIVGDAIDYIKELQEQEKGLRDEMTALEEDYEKNKPQWKRPILKEQGGTRRIQSSSDSTRRTQIEVEVNQIGKIEFLVKIHSERKRGGFARLMETIHLFGLQVTDANVNTFGDQVMNVLTVKAKKLDLHPDILREYLTKQAGSHERVGDEFKKA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0866 447 SMART finulus 263 312 IPR011598 GO:0046983
Mibi12g0866 447 Gene3D - 251 334 IPR036638 GO:0046983
Mibi12g0866 447 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 258 325 IPR036638 GO:0046983
Mibi12g0866 447 MobiDBLite consensus disorder prediction 208 225 - -
Mibi12g0866 447 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 165 424 - -
Mibi12g0866 447 CDD ACT_UUR-ACR-like 370 414 - -
Mibi12g0866 447 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 257 306 IPR011598 GO:0046983
Mibi12g0866 447 Coils Coil 303 323 - -
Mibi12g0866 447 MobiDBLite consensus disorder prediction 208 232 - -
Mibi12g0866 447 Pfam Helix-loop-helix DNA-binding domain 265 307 IPR011598 GO:0046983
Mibi12g0866 447 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 34 169 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0866 Mibi-ChrMibi12 22624416 22626743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0866 113 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10610 31.858 8.86e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g0866 bHLH-MYC_N 1.7e-15 CL0161