Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0865 ATGAACTATGTATCTGATGGGTCGACAGTTGTAGACTTGTATAGTAGGAAACCCGACCCGGTGCAGTTTACGTTGCGCGGCAACCCGAAAAACTCGACTACGCTACCGACACCGGAATCGCCCTCAGCGGTGGCCGGCAACTCGCCGTCGCCGCCTCCTTCGAGTATTGTTTCTCCTCCGGTTGCGCCGCCGCCGCCGAGGGTGTGGGGCCCACCTCCGCTGCCGCCGTCACCATCCACGAGAAGATCAAGTGGTTCTTCTTCGTCAAGGCATAGCAGCAGCGATGGTAATTCGGAAAAGTATGTTGGTTATGCTGTGGCTGGATTGCTCGGTTTCATCCTGCTTGCCATATTGGTCGTTTTCGTGGTTAAGAGGATGAGAAAACGGAAAGTGGCCCATGCTACACATTTTGGTGCTGCCAATAACTTATTCAAGAAACCAGGTACGGAAGGGTTTTACTATGCTCAGCAATCTGGGAAAGCAAATTATGCACAAGAGATATCATATAGTTCCCAAGTTTCAACCTCTCCCGACAATGGAACTGGGAATCAGTCGGGATCTGCGCAACATTTTGGGAGTCCAGACTCGGCCTGGAATGGTCAGATATCTTTTAGCTATGAGCAGATTATGGAGATAACTCGAGGATTTTCTAGTGAAAATATTTTAGGGGAGGGTGGATTTGGATGTGTCTACAAAGGTTGGCTTTCAGATGGAAAAGAAGTGGCTGTGAAGCAGCTTAAGGCTGGCAGCGGCCAAGGTGATAGGGAATTCAGGGCAGAGGTTGACATTATCAGCCGTGTTCATCATCGGCATTTGGTATCATTAGTTGGCTATTGCATAGCTGATCACCGAAGAATGCTTATCTATGAGTTCCTTCCTAATAGAACTCTTGAATATCACTTGCATGCCAGAGGAGTGAAAGTCTTAGATTGGGACATGAGGATGAAGATTGCAATTGGCTCTGCAAAAGGCTTATCATATTTGCATGAAGACTGCAACCCAAAAATTATCCACAGAGATATTAAGTCAGCGAACATACTTTTGGATAATGCGTTTGAGGCAAAGGTTGCAGACTTTGGACTTGCTAGGCTACATGATGATGCCAACACGCACGTATCAACTCGGGTTATGGGGACTTTTGGGTATTTGGCTCCAGAGTATGCAACAAGTGGAAAATTGACGGACAGATCAGATGTTTTCTCCTTTGGAGTTGTCCTCCTTGAACTTATAACAGGGAGAAAACCTGTTGATCAAACTCAGCCTTTAGGGGAAGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCATCGTGCCATTGAGACCCGAGATTTCAGCGAATTAGTGGATGAAAGGCTTAACATGCAATTTGTTGAGAGTGAAATGTGCAGAATGATAGAAGCAGCTGCAGCTTGTGTTCGCCACTCTGCTCCAAAACGGCCTCGTATGATTCAGGTGGTAAGAGCATTGGATAGTCGGGATGGATCATGTGATTTATCAAATGGGGTGAAATATGGTCAGAGCACTATTTATGATGCTAGCAACTACAGCGAAGGCGCCATTGTGAAGTTCAGGAAAATGGCCATTGATAGTTTTAGTGAATCAGAATTGAATGGGGACAGTGGAGATTGTTCTTCTCCGGTAGATCTTTCTGGACAACAACATTCATGGCTTAAGAGTGCTTCAAGTGGCGAATCAGAGTCTCTGGCTTTCAATGCAAGAAGGACTTAG 1728 0.4641 MNYVSDGSTVVDLYSRKPDPVQFTLRGNPKNSTTLPTPESPSAVAGNSPSPPPSSIVSPPVAPPPPRVWGPPPLPPSPSTRRSSGSSSSRHSSSDGNSEKYVGYAVAGLLGFILLAILVVFVVKRMRKRKVAHATHFGAANNLFKKPGTEGFYYAQQSGKANYAQEISYSSQVSTSPDNGTGNQSGSAQHFGSPDSAWNGQISFSYEQIMEITRGFSSENILGEGGFGCVYKGWLSDGKEVAVKQLKAGSGQGDREFRAEVDIISRVHHRHLVSLVGYCIADHRRMLIYEFLPNRTLEYHLHARGVKVLDWDMRMKIAIGSAKGLSYLHEDCNPKIIHRDIKSANILLDNAFEAKVADFGLARLHDDANTHVSTRVMGTFGYLAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDQTQPLGEESLVEWARPLLHRAIETRDFSELVDERLNMQFVESEMCRMIEAAAACVRHSAPKRPRMIQVVRALDSRDGSCDLSNGVKYGQSTIYDASNYSEGAIVKFRKMAIDSFSESELNGDSGDCSSPVDLSGQQHSWLKSASSGESESLAFNARRT 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0865 575 SUPERFAMILY Protein kinase-like (PK-like) 196 489 IPR011009 -
Mibi12g0865 575 MobiDBLite consensus disorder prediction 537 575 - -
Mibi12g0865 575 MobiDBLite consensus disorder prediction 1 98 - -
Mibi12g0865 575 FunFam proline-rich receptor-like protein kinase PERK8 292 504 - -
Mibi12g0865 575 FunFam Proline-rich receptor-like protein kinase PERK8 189 291 - -
Mibi12g0865 575 MobiDBLite consensus disorder prediction 80 98 - -
Mibi12g0865 575 Gene3D Transferase(Phosphotransferase) domain 1 292 502 - -
Mibi12g0865 575 ProSitePatterns Protein kinases ATP-binding region signature. 222 244 IPR017441 GO:0005524
Mibi12g0865 575 SMART serkin_6 216 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0865 575 Pfam Protein tyrosine and serine/threonine kinase 219 489 IPR001245 GO:0004672|GO:0006468
Mibi12g0865 575 CDD STKc_IRAK 222 490 - -
Mibi12g0865 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 336 348 IPR008271 GO:0004672|GO:0006468
Mibi12g0865 575 ProSiteProfiles Protein kinase domain profile. 216 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0865 575 MobiDBLite consensus disorder prediction 25 44 - -
Mibi12g0865 575 MobiDBLite consensus disorder prediction 45 79 - -
Mibi12g0865 575 Gene3D Phosphorylase Kinase; domain 1 183 291 - -
Mibi12g0865 575 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 113 530 - -
Mibi12g0865 575 MobiDBLite consensus disorder prediction 170 194 - -
Mibi12g0865 575 MobiDBLite consensus disorder prediction 537 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0865 Mibi-ChrMibi12 22618321 22623687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0865 74 544 Trihelix Transcription Factor Family AT1G70460 61.429 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi12g0865 PK_Tyr_Ser-Thr 4.3e-48 CL0016