Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0860 ATGTCTGCTTCTCCTTCTCCTTCATTCTCCTCCACTACTTCCCACCTCAGAACCCTTCCTTCTCTTCGGTTTTCCTTCAATTTTAGGGAAAACCGAAAACAGGTCACACCCACAAGCACCTCTATCCAAAAACGGAATCTTTTTTCGTCAAGGTCTGGTAGATTTGTGGTGAAATCTCAGACCACTAGTGCTCCTGCTTCTTCTCAATCTGTTACTGTCACACCCGTATCTTCCCAAATGAAGGCATGGGTTTATGGAGAATATGGGGGTGTTGATGTTTTGAAGTTCGATTCCAACGTTGGTGTTCCTGATTTTAAGGAAGATGAGGTCCTTATTAAGGTTGTCGCTGCTGCTCTTAACCCTGTTGATGGCAAAAGGAGGCAGGGAAAGTTCAAGGCCACTGATTCTCCCCTTCCGACTGTTCCAGGTTATGATGTTGCTGGAGTAGTGGCAAAGGTTGGTAGTCAAGTGAAAGACTTCAAAGTGGGTGATGAAGTATATGGGGATATAAATGAGAAAGCCCTTGAGGGACCTAGGCAGTTTGGATCTCTGGCAGAGTATACTGCTGTTGAAGCAAAGTTGTTAGCACCAAAACCTAAGAATCTGGATTTCGCTCAGGCTGCTGGTCTTCCTCTCGCGATTGAGACGGCATATGAGGGTCTGGAGAGGACTGGCTTTTCAGCTGGTAAATCCATTCTTGTTCTGAATGGTTCTGGTGGAGTTGGAAGCTTAGTGATTCAGCTAGCAAAGCATGTTTTTGGCGCATCAAGAGTTGTTGCCACATCAAGCACTAGACATCTGGATCTGCTAAAGAGCTTGGGTGCTGATTTGGCTATTGACTACACAAAGGAGAACTTTGAAGATTTGCCTGAAAAATTTGATGTAGTTTATGATGCCATTGGGCAATGCGACCGAGCAGTGAAGGCTGTGAAAGAAGGAGGTAGCGTGGTGGCATTGACTGGTGCCGTGACACCACCCGGCTTCAGATTTGTTGTGACATCGAATGGTGAAGTTCTGAGGAAACTGAACACTTATTTGGAGAGTGGGAAGGTAAAGGCAGTTGTTGACCCCAAAGGTCCATTCTCCTTCGCTCAGGTTGCTGATGCCTTCTCTTACCTTGAGACCAATAGAGCAACTGGGAAAGTGGTTGTATATCCAATCCCATGA 1167 0.4593 MSASPSPSFSSTTSHLRTLPSLRFSFNFRENRKQVTPTSTSIQKRNLFSSRSGRFVVKSQTTSAPASSQSVTVTPVSSQMKAWVYGEYGGVDVLKFDSNVGVPDFKEDEVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVAKVGSQVKDFKVGDEVYGDINEKALEGPRQFGSLAEYTAVEAKLLAPKPKNLDFAQAAGLPLAIETAYEGLERTGFSAGKSILVLNGSGGVGSLVIQLAKHVFGASRVVATSSTRHLDLLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAVKEGGSVVALTGAVTPPGFRFVVTSNGEVLRKLNTYLESGKVKAVVDPKGPFSFAQVADAFSYLETNRATGKVVVYPIP 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0860 388 SUPERFAMILY GroES-like 77 234 IPR011032 -
Mibi12g0860 388 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 202 326 IPR036291 -
Mibi12g0860 388 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 72 388 IPR044626 GO:0016628
Mibi12g0860 388 Gene3D - 87 384 - -
Mibi12g0860 388 Gene3D - 221 335 - -
Mibi12g0860 388 Pfam Zinc-binding dehydrogenase 273 384 - -
Mibi12g0860 388 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 229 250 IPR002364 GO:0008270|GO:0016491
Mibi12g0860 388 Pfam Alcohol dehydrogenase GroES-like domain 108 170 IPR013154 -
Mibi12g0860 388 CDD MDR_like_2 80 384 - -
Mibi12g0860 388 SMART PKS_ER_names_mod 89 384 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0860 Mibi-ChrMibi12 22555544 22558065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0860 107 327 Monolignol Biosynthesis Gene Families AT4G37970 24.597 3.52e-06 46.6