LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi12g0842	ATGGGAGTGGATATAATTGAAGAGAGCAGTGTGAGATTGTTAACTAGCAGCAGTGGTGGAAGCACTGGATCTAGGTGGGTTGATGGGACTGAAGTGGAATGGGAGGTTGTTCCATGGCCGAAGGAGAGTGAGAATGAAGGATTGAGCTCAATTCGAAGAAGGCTTGTGAAGAAGCCCAAGAGAGTTGATTCACTTGATGTTGAAGCCATGGAGATTTTTGGGAAGCATGATCACTACTCCAAGGATCCTTCCTTTTGGACCACACTAGCACTAGCATTTCAGACTCTCGGAGTGGTATATGGTGATATGGGAACAAGTCCTCTCTATGTCTTCTCTGATGTGTTCAGCAAGGTTCCAATTGAGTCAGAAATTGATATCTTGGGGGCCTTATCACTAGTGATGTACACAATAGCTATTATACCCTTGGCAAAGTATGTTTTTATAGTCCTCAAAGCAAATGATAATGGAGAAGGTGGAACATTTGCATTGTACTCACTGATTTGCAGGTATGCAAATGTGAGTCTTCTTCCAAATCGTCAGCAAGCTGATGAGTACATCTCCAGCTTTAAGCTTAAACTACCCACTCCAGAGTTGGCAAGGGCTTTGACCATAAAGGAAACTCTGGAAAAAAAGTCATCGCTGAAAACCCTTCTGTTGCTGTTGGTTCTGATGGGAACTTCCATGATTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCCATAAGTGGTTTGCAAGGTCAGGTTAATGGATTTGATACAAAGGGGGTGGTTATTGTTTCAATTGTAGTCCTTGTGGCTTTGTTCAGCATACAACGATTTGGAACTGGTAAAGTGGGTTTTATGTTTGCTCCTGTGCTTGCTTTATGGTTCTCTTCTCTGGCTTTGATTGGAATATACAATATATTCAAGTATGACGCCAGTGTCCTGAGAGCCTTCAATCCAGCTTATATATATTATTTCTTTATGAAGAACACAAAAACCGCATGGTCATCTCTTGGCGGTTGTGTTTTGTGCATTACAGGTGCTGAAGCAATGTTTGCTGATCTGGGTCACTTTTCTGTACGATCAATCCAGATTGCCTTTTCTATTGTGGTATTTCCCTGTCTTCTCCTTGCTTATATGGGCCAAGCTGCTTATCTGATGAAGCACCCTTATTCTCATTCAAGAATATTCTATGAATCTGTTCCAGAGAGTCTGTTCTGGCCAGTGTTTGTGGTAGCCACACTTGCTGCTATGATTGCCAGCCAAGCTATGATATCTGCTACATTTTCATGTGTAAAGCAATCCATGGCTTTGGGCTGCTTTCCGAGGCTCAAGATCATTCACACCTCAAAAAGGTTTATGGGTCAAATATACATCCCTGTAATCAACTATTTTCTGTTGATCATGTGCATAGTAGTTGTTTCCATCTTCCAGAGCACTACTAGTATTGCAAATGCATATGGCATTGCTGAAGTTGGCGTCATGATGGTTAGCACCACCTTAGTGAGTCTTGTAATGCTTCTGATTTGGCAGACCAACTTATTCCTAGTTTTTGGTTTCCTATTCGTATTTGGATCAGTAGAGCTCGTTTACATGTCCTCTGTCCTGTCAAAAATCACAGAGGGTGGCTGGCTTCCACTTGTTTTTGCTTGCTTTTTCCTCTCTATAATGTACACTTGGAACTATGGAAGTGTTCTGAAATACCAAAGTGAAGTCAGGGAGAAGATCTCCATGGACCTGATGGTTGATCTTGGCTCCAACCTTGGAACTGTAAGAGTACCGGGAATCGGATTATTATACAATGAACTTGTCCACGGCATTCCCTCCATTTTTGCTCAGTTCCTCTTGAACCTCCCTGCTGTCCACTCCACTATAGTTTTTGTTTGCATCAAATATGTTCCAGTCCCAGTGGTTCCCCTGGAGGAAAGATTTCTATTTCGAAGAGTCGGCCCAAAAGATTACCACATGTTCCGCTGTGTTGCCCGGTATGGCTACAAAGACATAAGGAAGGAAGATCACCACGCTTTTGAGCAGCTTCTAATTGAAAGCCTGGAGAAATTCTTGAGAAAGGAGGCTCATGATAGTTCCTGGGAGGTCAATAAGAATGAGGACATGGATAGTGTCTCAGTGATATCAAAGGACTCTGATCTTCCCAGTGGAAATGTATCTGAGGAACTAAAGATTCCATTGATGCAGGGTCAACAACCAGAAGAAACAGGAGCTTCTACCTCTGAGCAAGCCTCTATCTCACTGCCGGCTAGTGTCATGTCATCAGATGAAGACCCAAGTCTAGAATATGAGCTTGCAGCTTTAAGGGAAGCGACGGAGTCAGGATTCACCTACTTGCTTGGTCATGGGGATGTGAGGGCAAAGAAGAACTCCATTTTCATTAAAAAGCTGATGATCAATTATTTCTATGCATTTCTGAGAAATAATTGCAGAGGAGGTACAGCAAACATGAAAGTTCCTCACACGAACATCATTCAAGTGGGGATGACTTACATGGTCTGA	2505	0.4263	MGVDIIEESSVRLLTSSSGGSTGSRWVDGTEVEWEVVPWPKESENEGLSSIRRRLVKKPKRVDSLDVEAMEIFGKHDHYSKDPSFWTTLALAFQTLGVVYGDMGTSPLYVFSDVFSKVPIESEIDILGALSLVMYTIAIIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVSLLPNRQQADEYISSFKLKLPTPELARALTIKETLEKKSSLKTLLLLLVLMGTSMIIGDGILTPAISVMSAISGLQGQVNGFDTKGVVIVSIVVLVALFSIQRFGTGKVGFMFAPVLALWFSSLALIGIYNIFKYDASVLRAFNPAYIYYFFMKNTKTAWSSLGGCVLCITGAEAMFADLGHFSVRSIQIAFSIVVFPCLLLAYMGQAAYLMKHPYSHSRIFYESVPESLFWPVFVVATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSKRFMGQIYIPVINYFLLIMCIVVVSIFQSTTSIANAYGIAEVGVMMVSTTLVSLVMLLIWQTNLFLVFGFLFVFGSVELVYMSSVLSKITEGGWLPLVFACFFLSIMYTWNYGSVLKYQSEVREKISMDLMVDLGSNLGTVRVPGIGLLYNELVHGIPSIFAQFLLNLPAVHSTIVFVCIKYVPVPVVPLEERFLFRRVGPKDYHMFRCVARYGYKDIRKEDHHAFEQLLIESLEKFLRKEAHDSSWEVNKNEDMDSVSVISKDSDLPSGNVSEELKIPLMQGQQPEETGASTSEQASISLPASVMSSDEDPSLEYELAALREATESGFTYLLGHGDVRAKKNSIFIKKLMINYFYAFLRNNCRGGTANMKVPHTNIIQVGMTYMV	834

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi12g0842	834	TIGRFAM	kup: potassium uptake protein	91	834	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Mibi12g0842	834	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	84	832	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Mibi12g0842	834	Pfam	K+ potassium transporter	92	665	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi12g0842	Mibi-ChrMibi12	22252823	22260398	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi12g0842	4	834	Inorganic Solute Cotransporters	AT1G60160	73.804	0.0	1223