Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0836 ATGCCGTCACATAGATCGAAATCGGAGAAACATGATTCTGCGAAGCAGCCTCGTCGAGATCCGTATGAGGTTCTTGGCGTCTCACGCAGCTCGACAGATCAGGAAATCAAATCTGCTTACCGGAAAATGGCGCTCAAATATCATCCCGACAAGAATGCTAACGATCCTAAAGCGGCTGATATGTTTAAAGAGGTCACCTTTTCATACAATATCTTGTCAGATCCTGACAAACGGCGTCAATACGACTCAGCTGGTTTTGAGGCCGTTGAATCAGATAGCCAAGAATTGGAGTTGGATCTTTCAAGTTTAGGTGCTGTGAATACAATGTTTGCTGCACTTTTTAGTAAACTTGGCGTGCCAATTAAGACAACTGTATCAGCAACTGTTTTGGAAGAGGCACTTAATGGTGTGGTGACTTTTCGTCCTCTTCCCTTAGGCCATCCTATATCTAGAAGGGTTGAGAAGCAATCAGCTCACTTCTATTCAGTCATAATAACTGAAGAAGATGCACGGGCTGGTTTTGTTTGTCGGGTGCAATCATCTGACAAAAGCAAATTTAAGTTGTTATATTTTGACCAAGAAGAGAATGGTGGATTGAGTCTTGCACTTCAGGAAGATAGTGCAAAAACAGGAAAAGTTACCTCTGCCGGAATGTATTTTCTTGGTTTTCCTGTTTATCGGCTTGATCAAACAGCGAACTCAATGGCTGCTGCCAAGGATCCTGATACATCATTTTTCAGAAAATTGGATGGGTTCCAACCATGTGAATTAACAGAATTGAAGGCCGGTACCCATGTATTTGCTGTTTATGGTGACAATTTCTTCAAGAGTGCAAGCTATACGATAGAAGCATTATGTGCTGCACCTTTCAGTCAAGAAAAAGAGAGCCTCAGGGACATTGAAGCCCAAATCTTGTCCAAACGAGCAGAACTATCTAAATTTGAGAGTGAATACCGGGAGGTTCTGGCACAATTTACAGAGATGACAAACAGATATGCTCAAGAAATGCAAGTGATTGATGACCTACTGAAGCAAAGAAATGAGATACACGCATCTTATACTATTGCTCCACTAAAACGTAGTACAACCTTGCTGAGTGTTTGTTCTAGTGAAGAAGGCTTTGCCAAAATGACAACATGA 1140 0.4175 MPSHRSKSEKHDSAKQPRRDPYEVLGVSRSSTDQEIKSAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEAVESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGVVTFRPLPLGHPISRRVEKQSAHFYSVIITEEDARAGFVCRVQSSDKSKFKLLYFDQEENGGLSLALQEDSAKTGKVTSAGMYFLGFPVYRLDQTANSMAAAKDPDTSFFRKLDGFQPCELTELKAGTHVFAVYGDNFFKSASYTIEALCAAPFSQEKESLRDIEAQILSKRAELSKFESEYREVLAQFTEMTNRYAQEMQVIDDLLKQRNEIHASYTIAPLKRSTTLLSVCSSEEGFAKMTT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0836 379 MobiDBLite consensus disorder prediction 1 33 - -
Mibi12g0836 379 Gene3D DnaJ domain 4 103 IPR036869 -
Mibi12g0836 379 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Mibi12g0836 379 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Mibi12g0836 379 Pfam DnaJ domain 20 82 IPR001623 -
Mibi12g0836 379 PRINTS DnaJ domain signature 40 55 IPR001623 -
Mibi12g0836 379 PRINTS DnaJ domain signature 57 77 IPR001623 -
Mibi12g0836 379 PRINTS DnaJ domain signature 77 96 IPR001623 -
Mibi12g0836 379 PRINTS DnaJ domain signature 22 40 IPR001623 -
Mibi12g0836 379 Coils Coil 297 317 - -
Mibi12g0836 379 MobiDBLite consensus disorder prediction 1 19 - -
Mibi12g0836 379 SUPERFAMILY Chaperone J-domain 17 89 IPR036869 -
Mibi12g0836 379 SMART dnaj_3 19 77 IPR001623 -
Mibi12g0836 379 CDD DnaJ 20 74 IPR001623 -
Mibi12g0836 379 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 362 - -
Mibi12g0836 379 FunFam Chaperone protein dnaJ 16 4 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0836 Mibi-ChrMibi12 22140567 22144385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0836 13 83 C2H2 Transcription Factor Family AT1G74250 42.105 8.18e-12 64.7