Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0816 ATGGTCAAAGAATCCCGTATATATAAAAATCTCGTTGGAGGAATTCTGGTTTTTGTTCATTCTCCGAAACTTTCTCGCTGTTTCTTTGATTTTCTCCCCATTTTCCCTCTCTCTCTCTCAACGCGGACGCGGCCTCCATTTTCTTCGCCCCCATTTCTCTCTCATCACTTCAGCTCAAAACCCAGGAGGAGTTTTCTCACTTTGCTGATCTTCTTCATCGCCAGTACAAGAAGAAAGAAGGATATCAAGGATACAATTACCATTTCACCCTTGATGGCATCAAGATCATTTGCCAATCTCTTAGACTTGGTTAGTGGAGGCTTTTTGGATGCTCCCCACACGCCAAGAGCTCTTCCAAGAGTTATGACGGTTCCTGGAGTTATTTCTGACCTAGATGGTCTTGGTAATAATGATGCGGATTCAGATGCAAGCTCATCTGGGTGTCGGGAGCGGAAAATTCTAGTGGCAAACATGCTGCCACTACAGGCTAAAAGAGATGCAGAATCTGCTAAATGGTGTTTCAGTTTGGATGAGGATTCAATTTTACTACAATTGAAAGATGGTTTTTCTTCTGATACTGAGGTTATCTATGTGGGTTCTTTAAAAGTTGAAATAGATCCCAGCCAGCAGGAAGAAGTTGCTCAGAAACTACTGGAGGATTTCAATTGTGTACCTACCTTTTTACCACATGAACTCCAGAAGAGGTTTTATCTTGGCTTTTGTAAGCAGCAACTTTGGCCCCTTTTTCATTATATGCTACCTATGTGCCCAGATCATGGCGACCGCTTTGACCGGATGCTTTGGCAAGCTTATGTTTCCGCAAACAAAATATTTGCAGACAAGGTTATGGAAATAATCAATCCTGATGACGATTTTGTTTGGGTTCATGACTATCACTTGATGGTTTTGCCAACATTCCTTAGGAAGCGATTTAGTCGAGTTAAACTTGGATTCTTCCTTCACAGTCCTTTCCCTTCATCTGAAATTTATAGAACTCTGCCAGTACGAGATGAAATTCTGAGGGGACTGTTGAATTCGGATTTAATTGGTTTTCATACATTTGACTATGCTCGCCATTTCCTCTCTTGCTGCAGCAGAATGCTGGGTCTGGACTATGAATCTAAGCGGGGACATATAGGTCTTGATTACTTTGGCCGCACGGTATATATTAAAATTCTGCCTGTTGGCATTCACATGGGCAGGCTTGAATCTGTATTGAATCTTCCTTCTACATCTGCAAAAATAAAAGAGATTCAGGAAGAATTTAAGGGAAGGAAGCTGATTCTTGGTGTCGATGATATGGATATTTTTAAGGGCATCAATTTGAAACTTCTAGCTTTGGAGCAGCTACTGCAACAGAACCCAGACTTGATTGGAAAGGTCGTTCTAGTTCAAATTATAAATCCTGCTAGGAGTTCAGGGAAGGATGTTCAAGAAGCAAAAAAGGAAACAAACTTAATCACCCAAAGGATCAATGATACATATGGCTCAAAGCATTATCAGCCAGTTGTTCTCATTGACCGTCATGTTCTTAGATTTGAAAAGAGTGCCTATTATGCTGTAGCTGATTGTTGCATTGTCAATGCTGTGAGGGATGGTATGAACTTAGTCCCATACAAATATGTTGTCTGCAGACAAGGAACTACTCAACTAGACAAAGCACTGGGTAGAAAAAGTGATTCCCCTCGTACAGGCATGCTTGTGGTCTCTGAGTTCATTGGTTGTTCCCCTTCTCTGAGTGGAGCAATTAGGGTCAATCCCTGGGATATTGATGCAGTAGCTGATGCAATGTATGTGGCCATCACAACCTGTGATTCAGAGAAGCAATTGAGGCATGAGAAGCACTATCGATATGTTAGTTCTCATGATGTGGCTTATTGGGCGCGCAGCTTCATGCAGGATTTAGAGAGGGCATGCATAGACCATTACACCAAAAGTTGCTGGGGAATCGGTCTGGGCCTTGGTTTCAGAGTCGTTTCTCTTTCTCCTGGTTTTAGGAGGCTGTCCATTGATCATGTTGTTTCAGCTTATAAAAGAACTCACAAAAGGGCCATATTTCTTGATTTTGATGGTACACTTGTACCACACTCTTCTATAAATAAAACCCCCAGCTCTGAAGTTATATCTGTGCTGAATACCCTGTGTAATGATGCCAAGAACAGTGTGTTCATTGTTAGTGGAAGGGGAAGAGATTCTCTTGGTGAGTGGTTTGCTTCATGCAAGAGGCTGGGACTTGCGGCTGAACATGGTTACTTTTTAAGGTGGAATGGAGACTCAGAATGGGAAACCAGCCACTTGTCTGCTGACCTTGAATGGAAAAATATAGTGGAGCCTGTCATGACTTCATATACAGAGGCAACTGATGGGTCTAATATTGAAACTAAAGAAAGTGGTTTGGTGTGGCATCATCAAGATGCGGACCCTGATTTCGGATCCTGCCAAGCTAAAGAGTTGTTGGATCACCTGGAAAGTGTGCTCACTAATGAACCAGCTGTCGTTACAAGGGGCCATCACATTGTGGAAGTCAAGCCACAGGGAATAAGCAAGGGTATAGCAGCAGAGACAATTCTCTCGACACTGGCAAACGGCGGAAATCTGCCTGATTTTGTGATGTGCATTGGAGATGACAGGTCGGACGAAGACATGTTTGAGAGCATATCAAGGACAGTCTCTTGTCCTCCATTGCCAGCTGCTCCAGAGGCCTTTGCTTGCACTGTAGGTAGCAAGCCTAGCAAGGCCAAGTATTACCTCGATGATACTGCCGATGTTATTAGATTGCTTAAAGGTCTTGCAGCTGCATCAAATCCAAGGCCAAGGAATCCACCCCAGTACAAGGTTTCTTTCGAAAGCAGCACGGCTTGA 2862 0.4308 MVKESRIYKNLVGGILVFVHSPKLSRCFFDFLPIFPLSLSTRTRPPFSSPPFLSHHFSSKPRRSFLTLLIFFIASTRRKKDIKDTITISPLMASRSFANLLDLVSGGFLDAPHTPRALPRVMTVPGVISDLDGLGNNDADSDASSSGCRERKILVANMLPLQAKRDAESAKWCFSLDEDSILLQLKDGFSSDTEVIYVGSLKVEIDPSQQEEVAQKLLEDFNCVPTFLPHELQKRFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRMLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRFSRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVLNLPSTSAKIKEIQEEFKGRKLILGVDDMDIFKGINLKLLALEQLLQQNPDLIGKVVLVQIINPARSSGKDVQEAKKETNLITQRINDTYGSKHYQPVVLIDRHVLRFEKSAYYAVADCCIVNAVRDGMNLVPYKYVVCRQGTTQLDKALGRKSDSPRTGMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMYVAITTCDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACIDHYTKSCWGIGLGLGFRVVSLSPGFRRLSIDHVVSAYKRTHKRAIFLDFDGTLVPHSSINKTPSSEVISVLNTLCNDAKNSVFIVSGRGRDSLGEWFASCKRLGLAAEHGYFLRWNGDSEWETSHLSADLEWKNIVEPVMTSYTEATDGSNIETKESGLVWHHQDADPDFGSCQAKELLDHLESVLTNEPAVVTRGHHIVEVKPQGISKGIAAETILSTLANGGNLPDFVMCIGDDRSDEDMFESISRTVSCPPLPAAPEAFACTVGSKPSKAKYYLDDTADVIRLLKGLAAASNPRPRNPPQYKVSFESSTA 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0816 953 CDD GT20_TPS 151 636 IPR001830 GO:0003824|GO:0005992
Mibi12g0816 953 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 119 932 IPR001830 GO:0003824|GO:0005992
Mibi12g0816 953 Gene3D - 682 796 IPR023214 -
Mibi12g0816 953 Gene3D - 812 941 IPR023214 -
Mibi12g0816 953 FunFam Alpha,alpha-trehalose-phosphate synthase 405 620 - -
Mibi12g0816 953 Pfam Trehalose-phosphatase 686 920 IPR003337 GO:0003824|GO:0005992
Mibi12g0816 953 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 812 943 - -
Mibi12g0816 953 Gene3D Glycogen Phosphorylase B; 404 620 - -
Mibi12g0816 953 TIGRFAM T6PP: trehalose-phosphatase 681 930 IPR003337 GO:0003824|GO:0005992
Mibi12g0816 953 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 684 890 IPR006379 -
Mibi12g0816 953 SUPERFAMILY HAD-like 683 931 IPR036412 -
Mibi12g0816 953 CDD HAD_TPP 684 925 - -
Mibi12g0816 953 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 682 799 - -
Mibi12g0816 953 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 144 403 - -
Mibi12g0816 953 Gene3D Glycogen Phosphorylase B; 145 403 - -
Mibi12g0816 953 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 151 639 - -
Mibi12g0816 953 Pfam Glycosyltransferase family 20 151 636 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0816 Mibi-ChrMibi12 21505018 21509943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0816 92 950 Trehalose Biosynthesis Gene Families AT1G60140 72.410 0.0 1342