Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0782 ATGCCGTTTGGGTTTGTCTCTGCTTGGAACAAGAGACGTAGAACCAAGCCTCAGGATCACACTGACCCTTGGATATATAAACCAGTGGAGTTATGGCAGATTGAAGATCAAACAGCTCAAAGACCAACGAAGAGGAGGCATGGATCGTCTGTGTTCACACTCAAGGAGATGCAAGATGCAACTTGTTCTTTCAGTGATGACAATCTCCTTGGAAAAGGAGGTTTCGGCAAAGTCTACAAAGGCACTTTGCATTCCGGAGAGGTGGTAGCGATCAAGAAAATGGAAGTGCCGGCATTTAAAGAAGCAGAGGGGGAGAGAGAATTCAGAGTGGAAGTGGACATATTGAGCAGATTGGACCACCCAAATCTTGTTTCCTTGATAGGCTATTGTGCTGATGGGAAGCATAGATTCTTGGTTTATGAGTATATGCATAATGGCAATCTGCAAGATCATTTAAATGGTATTGGAGAGAGAAAAATGGATTGGCCTTCAAGACTGAAAGTGGCACTAGGTACAGCAAGAGGCCTTGCTTATCTACATTCAAGTTCTGCCGTTGGAATTCCTATTGTTCATAGGGATTTCAAATCCACCAATGTTCTCTTAAATTCTAACTTCGAAGCAAAGATATCAGATTTTGGGCTGGCTAAGTTGATGCCTGAGGGTCAAGAGACTCATGTCACAGCTAGAGTACTTGGTACCTTTGGATACTTTGACCCAGAGTATACTTCGACAGGGAAACTAACTCTACAAAGTGATGTATACGCATTTGGAGTTGTTCTTCTTGAGCTCTTAACAGGACGCCGAGCTGTTGATCTTAACTTGGGCCCCAACGATCAAAACCTCGTCTTACAGGTAAGGCATATATTGAATGATAGGAAGAAGCTGAGGAAGGTGATAGATGCAGAAATGGCGAGGAACTCATACACCATGGAGTCCATTAGCATGTTTGCCAATCTTGCTTCTAGATGTGTCCGTACTGATAGTTCTGAGAGGCCATCCATGTTAGATTGTGTCAAAGAACTCCAACACATTTTATATACCAATTCAAGAGGCCTTGGAATGCTTTTGCATAGTTTTGGCATGATTTAG 1089 0.4288 MPFGFVSAWNKRRRTKPQDHTDPWIYKPVELWQIEDQTAQRPTKRRHGSSVFTLKEMQDATCSFSDDNLLGKGGFGKVYKGTLHSGEVVAIKKMEVPAFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGERKMDWPSRLKVALGTARGLAYLHSSSAVGIPIVHRDFKSTNVLLNSNFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNLGPNDQNLVLQVRHILNDRKKLRKVIDAEMARNSYTMESISMFANLASRCVRTDSSERPSMLDCVKELQHILYTNSRGLGMLLHSFGMI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0782 362 Gene3D Phosphorylase Kinase; domain 1 29 142 - -
Mibi12g0782 362 CDD STKc_IRAK 70 344 - -
Mibi12g0782 362 PIRSF ILK 32 352 - -
Mibi12g0782 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Mibi12g0782 362 SUPERFAMILY Protein kinase-like (PK-like) 50 347 IPR011009 -
Mibi12g0782 362 FunFam serine/threonine-protein kinase PBS1-like 32 142 - -
Mibi12g0782 362 ProSiteProfiles Protein kinase domain profile. 64 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0782 362 Gene3D Transferase(Phosphotransferase) domain 1 143 351 - -
Mibi12g0782 362 FunFam receptor-like serine/threonine-protein kinase NCRK 143 353 - -
Mibi12g0782 362 Pfam Protein kinase domain 65 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi12g0782 362 PANTHER OS01G0750732 PROTEIN 40 346 - -
Mibi12g0782 362 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0782 Mibi-ChrMibi12 20855352 20857920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0782 47 341 Receptor kinase-like Gene Family AT3G58690 45.667 8.43e-87 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Mibi12g0782 Pkinase 1e-50 CL0016