Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0778 ATGTCTCGCACTTGCTCACAGTGTGGCAATAACGGCCATAACTCCCGTACTTGTATCCACGGCGGCGCCGGCGGAGGCGAAGGAGGAATCGGCGGCGGCTCCGATGGTTCTTCTTCTTCTTCTAAGGAGAACGGTATTATGCTGTTCGGTGTACGGCTCACTCAAGGAAACTCATTCAGAAAAAGCGCTAGTATGACGAATCTCTCACAGTTTGATGCTCAGCCTCAAGATTCCAACGCCGTCGATGCCGGTTACGCTTCCGACGACGTCGTTCACGCCTCCACTCGAACTCGCGAGCGAAAGAGAGGTGTTCCATGGACGGAGGAAGAGCATAGGTTATTCCTATTAGGGTTACAGCAAGTCGGAAAAGGAGATTGGAGAGGTATTTCAAAGAATTTCGTCAAAACTCGAACTCCGACTCAGGTTGCGAGTCACGCTCAGAAGTACTTCCTTCGTAGGCACAATCAGAATCGGAGACGCCGAAGATCTAGTCTCTTTGACATCACCACCGATACTGTGATGGAATCGTCTTCAATGGAAGAAGATCAAGAAGCTGCGATTCCGCCTACATATCCACAGTTTTACTATGGAGGCTTTTCCGGTTTAAATTTGCCGGTGAAGTCAACGGCGAAGCCTATAAGGCCGATGCCGATCCTACCAGTGCCTCCTTCGTCGAAAATGGCGACACTGAATCTGAAGGAGAAAGCTCCTATTGAACCTTTACCATTATCACTGAAGCTGTCGGCGTCTTCGCCGCCGTCGACATCGAATGAGCAGTCACCGGCGAGTAGCCAGTCATCGCCGGCGACGGATTTTCCGGCGATATCTGGCAAGTTTAGCGGCGGAGGAGATAGCATAATCAGTGTGGCTTGA 873 0.5109 MSRTCSQCGNNGHNSRTCIHGGAGGGEGGIGGGSDGSSSSSKENGIMLFGVRLTQGNSFRKSASMTNLSQFDAQPQDSNAVDAGYASDDVVHASTRTRERKRGVPWTEEEHRLFLLGLQQVGKGDWRGISKNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSSMEEDQEAAIPPTYPQFYYGGFSGLNLPVKSTAKPIRPMPILPVPPSSKMATLNLKEKAPIEPLPLSLKLSASSPPSTSNEQSPASSQSSPATDFPAISGKFSGGGDSIISVA 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0778 290 ProSiteProfiles SANT domain profile. 101 154 IPR017884 -
Mibi12g0778 290 PANTHER TRANSCRIPTION FACTOR KUA1 1 254 - -
Mibi12g0778 290 MobiDBLite consensus disorder prediction 243 290 - -
Mibi12g0778 290 ProSiteProfiles Zinc finger CCHC-type profile. 5 18 IPR001878 GO:0003676|GO:0008270
Mibi12g0778 290 SUPERFAMILY Homeodomain-like 100 153 IPR009057 -
Mibi12g0778 290 SMART sant 102 152 IPR001005 -
Mibi12g0778 290 MobiDBLite consensus disorder prediction 247 273 - -
Mibi12g0778 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 154 IPR017930 -
Mibi12g0778 290 Pfam Myb-like DNA-binding domain 105 150 IPR001005 -
Mibi12g0778 290 ProSiteProfiles Myb-like domain profile. 98 150 IPR001005 -
Mibi12g0778 290 CDD SANT 105 150 IPR001005 -
Mibi12g0778 290 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 101 152 IPR006447 GO:0003677
Mibi12g0778 290 FunFam transcription factor MYB1R1 104 155 - -
Mibi12g0778 290 Gene3D - 106 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0778 Mibi-ChrMibi12 20802470 20803569 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi12g0778 Myb_DNA-binding 7.1e-11 CL0123