Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0761 ATGTCATCAAATGGCACCGTCGACTTCCGGCTTCCATGGGACGTGTTCCTGAGCTTCAGAGGTAGCGATACTCGCGATTGCCTAACCGTACCTCTCTATTTCGCGCTCCAATTACGCGGCGTTCGAGTTTTTCTTGACGATGTAGGGTTAGATCGAGGGGATCAGATAGCTCCGAGTCTACTCAAAGCGATTGATGACTCGGCCTCTTCGATTATCATCATCTCTCCTGATTACGCCTCTTCTCATTGGTGTTTGGAGGAGCTCGCTAAGATCTGCCATGTCGGCAGGCTCATTCTGCCCGTGTTCTACGGCGTAAGCCCTAATGATGTTCTCGAACAATCTGGTCCTTTCGAAGAGTCTTTCAAGGTTCATCAATCTAAGAGGAGTGAAGACGAGGTAATCAGGTGGAGGAAAGCTATGAAGAAAGTAGGTGGAATTGCTGGTTGGGTTTTTCAGAATCCCAGCCAAGAAGAACAACTAATTCGACTGTTAGTGCGAACGGTTCTGAAAGAACTAAGTAATACTCCGGTGGGTTTGGCTGAATTTAATGTTGGAATCAATTCTCGTGTTGAAGAAGTAATGAAATTGTTAGAGATGGAATCAAGTGATGGCGTGAGAGTATTGGGATTGTTTGGGATGAGTGGGGTTGGTAAGACAACCCTTGCAAGGGCTCTTTTTAACAGACTCTTTGAATGTTTTGAGCATCGTAGCTTCATTTCAAGTGTTAGAGATGAATCATCTAAAGATGGAGGTTTAATTGCTCTAAGAAACAGAATTATCAGTGACATTACCTCTCAAGTAGTTGTTGGTGATGATATCTCTGCTTTCAGAAGAACAATTGATGAATATCGAGTCCTGATAATCCTGGATGATGTTGATGATGTGAAGCAGCTCGATGCTTTAATAGGAAAAAGAGAATGGTTTCATGAGGGAAGCCGTATTGTAGTCACCTCAAGGGATACGCGAGCTTTGCCTGAGACTCATGTTAATGTCTTCTACGAGGTTAAGGTATTGGGTGACTCTGATTCGTTAGAATTATTTTGTTACCATGCAATGAGAAAGAAGGAACCTGGAGACAAAAATCTCTTGAAAATGTCGAAGGAAATAATGTCTCTTACAGGAAGATTGCCTTTGGCCTTGGAAGTGTTTGGTTCGATGTTGTTTGGTAAGACGAGGCAAGAGGAATGGGTTGATGCTATGGAGAAACTAAATGTGATTCAACCTGGGAATCTTCAAGAAGAATTTGAAGGTAAGGATCCTGAAAAAGGTCTCTTAACTAGTTTGAAGATGATGTCTTTTTGA 1302 0.4263 MSSNGTVDFRLPWDVFLSFRGSDTRDCLTVPLYFALQLRGVRVFLDDVGLDRGDQIAPSLLKAIDDSASSIIIISPDYASSHWCLEELAKICHVGRLILPVFYGVSPNDVLEQSGPFEESFKVHQSKRSEDEVIRWRKAMKKVGGIAGWVFQNPSQEEQLIRLLVRTVLKELSNTPVGLAEFNVGINSRVEEVMKLLEMESSDGVRVLGLFGMSGVGKTTLARALFNRLFECFEHRSFISSVRDESSKDGGLIALRNRIISDITSQVVVGDDISAFRRTIDEYRVLIILDDVDDVKQLDALIGKREWFHEGSRIVVTSRDTRALPETHVNVFYEVKVLGDSDSLELFCYHAMRKKEPGDKNLLKMSKEIMSLTGRLPLALEVFGSMLFGKTRQEEWVDAMEKLNVIQPGNLQEEFEGKDPEKGLLTSLKMMSF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0761 433 PRINTS Disease resistance protein signature 207 222 - -
Mibi12g0761 433 PRINTS Disease resistance protein signature 279 293 - -
Mibi12g0761 433 PRINTS Disease resistance protein signature 373 387 - -
Mibi12g0761 433 CDD AAA 210 325 - -
Mibi12g0761 433 Gene3D - 174 331 IPR027417 -
Mibi12g0761 433 Pfam NB-ARC domain 189 405 IPR002182 GO:0043531
Mibi12g0761 433 ProSiteProfiles TIR domain profile. 11 172 IPR000157 GO:0007165
Mibi12g0761 433 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 419 IPR044974 GO:0006952
Mibi12g0761 433 Pfam TIR domain 13 175 IPR000157 GO:0007165
Mibi12g0761 433 SMART till_3 12 146 IPR000157 GO:0007165
Mibi12g0761 433 Gene3D - 337 418 IPR042197 -
Mibi12g0761 433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 413 IPR027417 -
Mibi12g0761 433 Gene3D - 12 173 IPR035897 -
Mibi12g0761 433 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 149 IPR035897 -
Mibi12g0761 433 SMART AAA_5 204 342 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0761 Mibi-ChrMibi12 20358035 20360144 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0761 71 347 WRKY Transcription Factor Family AT4G12020 31.802 1.01e-28 117