Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0757 ATGTCACTGGACGGCGATGTCAGTTCGTCATCTCCGGTAGCTACCAGGCGGCATTGGGATGTGATCCTGAGCTACACAAGTTGGGATAATTGTGGTTGCTTCACTAAACCCCTCTCCGATGCCCTAAAATCTCACGACGTTAGGGTTTTTCTCGACGACGTTGGATTCGATCGTGGTGACCAGATATCCGAACAGAGTCATCTCGATGCTATTGATGACTCGGCGGCTTCGATCATCGTCGTCTCTCCTAACTACGCTTCTTCTCATTGGTCTCTGGAGAAGCTCGCTAAGATTTGCGACAGCCGGAGATTGATTCTGCCTGTGTTCTTCAATGTCAACCCGCGTCATGTTCGGAATCAGGTGGGTCCATTCGAACATTGTTTCGACGATCACAAAGCTAAGAGGTCTAAAGAAGATGTGCTAAGGTGGAGGAAAGCTATGAAGATAGTAGGTGGAACTGCTGGTTTTGTTCTTCCGAATCTCAGAGAAAAGGAGGCTGACCAAATTCGAGTTTTAGTGAAAACAATTCTGAGAAAACTGAGTAATACTCCGGTGGGTGTGGCTGAATTTACCGTTGGACTCGATGCTCGTATTGAAAAACTGTTGGAATCGATAGACATAAAATCCAATGGTGTAAGAGTATTGGGATTGTTTGGGATGGGTGGGGTTGGTAAGACAACCCTTGCAAAGGCTCTATTTAACAGACTCGTTGTGCATTTTGAGCATCGCAGCTTCATTTCAAGTGTTAGAGAAGAATCATCTAAAGATGGAGGTTTAATTGCTCTGAGAAACAGAATTATCAGTGACATTTCCTCTCGAGTAGTTGTTGGTGATGATATCTCTGCTTTCAGAAGAATAATTGATGAATATCGAGTCCTGATAATGCTGGATGATGTGGATGATGCAAAACAGCTCGATACTCTAATAGGCAAAAGAGAATGGTTCCATGAGGGAAGCCGTATAGTAGTCACCTCAAGGGATACACGAGCTTTGCCTGAGACTCATGTTAATGTCTCCTACGAGGTTAAGGTATTGGATGACTCTGATTCATTAGAACTATTCTGTTACCATGCAATGAGAAGAAATGAACCTGCAGATGACGATCTTTTGAAGTTTTCAAAGGAAATAGTGTCTCTAACCGGAGGGTTGCCTTTGGCTTTGGAAGTGTTTGGTTCAATGTTGTTTGGTAAGAGAAACAAAGAGGAGTGGGCTGATGTTGTGGAGAAGCTGAAGCTGATTCGACCTGGGAACGTACATAGAGTGTTGAAAATTAGTTATGAGGGATTAAATGAACAAGAGAAATGCATCTTCCTTGACATTGCTTGTCTTTTTGTTCAGATGAGGATGAATCGAGAAGATGTGATTGATATATTGAGAGGTTGTGAATTTGAGGGAGCGGAAGCAATCAATGTCCTCTCTAAGAAATGTCTGATAAAAATCAGAGAGGATGAAACCATTTGGATGCATGATCAGATTAGAGACATGGGAAGGCAAATTGTTGTGGATGAAAACCTTGTTGATCACGGTATGCGTAGTAGATTGTGGGATCGATCTCAAATTCTTGCTGTTTTGAGGAACTTGAAGGGAACAAGCAGAATTCGCGGGATGGTCCTAGACTTTGAGAAAGGAGCTACTAAAGATCATAAAGTTGATGAAGCAATTTCTGGGAGAAGCCTTCGATGTGGTTCCAGTTTTGCAAATGCCGTGACATTCCTTAAGCAGATGCACAGAAAATATTTTCAACGAGTTGAGAGAGACATAGCGGCTGGAGTAGTGCTCCCAACGAAGTCCTTTAAATCAATGGTGAACTTGATGCTGCTTCAGATCAATAATTGGAGATTGGAAGGGAAGTTTAAATTTTTCCCTGCAAAATTGAAGTGGCTACAATGGCATGGATGCCCTTTAAAATGCATGCCTTCTGATTTTTGGCCTAGAGAATTGGCTATCCTTGATCTCACACACAGCAATATTGAAAATCTGTGGAATCGGAAAGGCTACAAGGTGCCTGAGAACATAATGGTCATGAACCTGTCCGACTGCTACCACCTGGAGACCCTTCCTGATCTCAATGGTTGCCGACGTTTAGAGAAGATTGTTTCAGTGAACTGCATTAAACTAAGTAAGATTCACGAATCAATTGGCAATCTGACCACACTTCGTCATTTGAATCTGACTCGTTGTAGAGAACTTACTGAGTTATCCAATGGTATATCTGGGTTAGCAAATCTAGAGAGCCTCTGCCTCTCTGAGTGCTGGGAGTTGAAATCATTACCAAGAAATATGGCCAACTTGAAATCACTTAGAAAACTACTTGCTGATGGCACAGCTATATCAGAGCTGCCTGATACTATTTTTGGCCTTGAGAAACTTGAAATTCTTGTTTTAAATGGTTGCAAAAACTTAAAAAGACTACCTGACGACATAAGACATTTGTGTTCTCTGCAAGAACTGTCTCTTGACAAATCTGGATTAGAAGAAGTGCCCAACTCTGTGGGGCATTTGAAAAACCTTGAGAAGCTTGGTTTGATGCACTGCAAGTCTCTCACTGAGATTCCAGATTCCATCGGAGATCTTGTATCACTTCCAAAGCTTCAGCTTAATGGTAGTGCTATTAGGGAGCTACCTTCTTCGATTGGATCATTGTCTTGTCTAAGTGAACTATCTTTAGGATATTGTAAGTCTCTGAGAAACTTGCCCGAGTCTATTAAGCTTTTGGCCTCTGTTGTTGAGCTTCAGCTAGATTGGACAGCGATTACAGATTTGCCATGTGAGATTGGGGATATGAGGTTACTTAAAAAGCTTGAAATGAGGAATTGTCAGATGAAATATTTACCTGCATCGATTGGGAACCTCACAGCTCTTACAACCTTGAACATTTCCGACAGTAAAATTGTAGAACTGCCGGAGTCCATAGGAAGGCTCAAGAATTTAGTCTTTTTAAAGTTGGACAAATGCATATTACTCAGAAAGCTTCCCGATTCTATAGGATCTTTGAAGTCCTTGTACCATCTTAGGATGGAGGAAACGGGTCTGACAGAATTACCTCAAAGCTTTGGCATGCTTACCAACTTAAGGACTTTGAAGATGGCCAATAAGTCAGAATATAATATGCTTCAGGATTCTGTTGTGATTTCATTTTTCTGCTATATGATATATCTGAATGATCTGGATGCTCAGGGTTGGAGAATATCTGGGAAAATTCCTGATGATTTCAAGAATTTGTCCTCTTTACAGACTTTGAATCTAAGCCGAAACAATTTTTACAGCCTTCCTTACAGTATGGTAGGCCTTTCTGTTCTCAAGGAACTTAATCTTCAAAACTGCATCGAGCTGGTTTCTCTCCCTGCTCTTCCCCCGAGCTTGACGAAGTTGAATGCTGCAGACTGTTGTAACTTACAAAACATTCATGATCTTTCAAATTTAACAAATTTGCAGGAACTAAACTTCACCAATTGTGTAAAATTGGTGGATATTCCTGGTCTTGAACGGTTAGGGTCTTTAAAGAAATTGTTCTTTGGCGGATGCATTACATGCTCCTCCAAAATCCGCAAGAGATTTTCCAAGGTTCATTCTCTTCCTGTCTTTCCCCATCCCATCATGAATGAAAAGTACTGA 3615 0.4144 MSLDGDVSSSSPVATRRHWDVILSYTSWDNCGCFTKPLSDALKSHDVRVFLDDVGFDRGDQISEQSHLDAIDDSAASIIVVSPNYASSHWSLEKLAKICDSRRLILPVFFNVNPRHVRNQVGPFEHCFDDHKAKRSKEDVLRWRKAMKIVGGTAGFVLPNLREKEADQIRVLVKTILRKLSNTPVGVAEFTVGLDARIEKLLESIDIKSNGVRVLGLFGMGGVGKTTLAKALFNRLVVHFEHRSFISSVREESSKDGGLIALRNRIISDISSRVVVGDDISAFRRIIDEYRVLIMLDDVDDAKQLDTLIGKREWFHEGSRIVVTSRDTRALPETHVNVSYEVKVLDDSDSLELFCYHAMRRNEPADDDLLKFSKEIVSLTGGLPLALEVFGSMLFGKRNKEEWADVVEKLKLIRPGNVHRVLKISYEGLNEQEKCIFLDIACLFVQMRMNREDVIDILRGCEFEGAEAINVLSKKCLIKIREDETIWMHDQIRDMGRQIVVDENLVDHGMRSRLWDRSQILAVLRNLKGTSRIRGMVLDFEKGATKDHKVDEAISGRSLRCGSSFANAVTFLKQMHRKYFQRVERDIAAGVVLPTKSFKSMVNLMLLQINNWRLEGKFKFFPAKLKWLQWHGCPLKCMPSDFWPRELAILDLTHSNIENLWNRKGYKVPENIMVMNLSDCYHLETLPDLNGCRRLEKIVSVNCIKLSKIHESIGNLTTLRHLNLTRCRELTELSNGISGLANLESLCLSECWELKSLPRNMANLKSLRKLLADGTAISELPDTIFGLEKLEILVLNGCKNLKRLPDDIRHLCSLQELSLDKSGLEEVPNSVGHLKNLEKLGLMHCKSLTEIPDSIGDLVSLPKLQLNGSAIRELPSSIGSLSCLSELSLGYCKSLRNLPESIKLLASVVELQLDWTAITDLPCEIGDMRLLKKLEMRNCQMKYLPASIGNLTALTTLNISDSKIVELPESIGRLKNLVFLKLDKCILLRKLPDSIGSLKSLYHLRMEETGLTELPQSFGMLTNLRTLKMANKSEYNMLQDSVVISFFCYMIYLNDLDAQGWRISGKIPDDFKNLSSLQTLNLSRNNFYSLPYSMVGLSVLKELNLQNCIELVSLPALPPSLTKLNAADCCNLQNIHDLSNLTNLQELNFTNCVKLVDIPGLERLGSLKKLFFGGCITCSSKIRKRFSKVHSLPVFPHPIMNEKY 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0757 1204 Gene3D - 179 339 IPR027417 -
Mibi12g0757 1204 SMART till_3 18 153 IPR000157 GO:0007165
Mibi12g0757 1204 SUPERFAMILY L domain-like 895 1190 - -
Mibi12g0757 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 440 IPR027417 -
Mibi12g0757 1204 ProSiteProfiles TIR domain profile. 17 180 IPR000157 GO:0007165
Mibi12g0757 1204 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 807 IPR044974 GO:0006952
Mibi12g0757 1204 SMART LRR_typ_2 764 787 IPR003591 -
Mibi12g0757 1204 SMART LRR_typ_2 1074 1097 IPR003591 -
Mibi12g0757 1204 SMART LRR_typ_2 811 834 IPR003591 -
Mibi12g0757 1204 SMART LRR_typ_2 716 740 IPR003591 -
Mibi12g0757 1204 SMART LRR_typ_2 905 928 IPR003591 -
Mibi12g0757 1204 SMART LRR_typ_2 998 1020 IPR003591 -
Mibi12g0757 1204 SMART LRR_typ_2 858 881 IPR003591 -
Mibi12g0757 1204 SMART LRR_typ_2 951 974 IPR003591 -
Mibi12g0757 1204 Gene3D - 18 178 IPR035897 -
Mibi12g0757 1204 Gene3D Ribonuclease Inhibitor 585 910 IPR032675 -
Mibi12g0757 1204 Pfam TIR domain 26 182 IPR000157 GO:0007165
Mibi12g0757 1204 Gene3D - 344 430 IPR042197 -
Mibi12g0757 1204 Gene3D Ribonuclease Inhibitor 911 1117 IPR032675 -
Mibi12g0757 1204 PRINTS Disease resistance protein signature 380 394 - -
Mibi12g0757 1204 PRINTS Disease resistance protein signature 214 229 - -
Mibi12g0757 1204 PRINTS Disease resistance protein signature 286 300 - -
Mibi12g0757 1204 PRINTS Disease resistance protein signature 832 848 - -
Mibi12g0757 1204 Pfam NB-ARC domain 198 415 IPR002182 GO:0043531
Mibi12g0757 1204 SUPERFAMILY L domain-like 487 922 - -
Mibi12g0757 1204 Pfam Leucine rich repeat 1071 1108 IPR001611 GO:0005515
Mibi12g0757 1204 Gene3D Ribonuclease Inhibitor 1118 1194 IPR032675 -
Mibi12g0757 1204 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 155 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0757 Mibi-ChrMibi12 20328537 20334860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0757 58 911 WRKY Transcription Factor Family AT4G12020 28.896 1.50e-69 255