Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0749 ATGAGTGGATGGGACAGGGTTCGAACATCGTCTTCTTCTTCTTCGAGATCGTCTCTTGGAATGAATTCCAATCCCACTCGTAACCTCCCTAATCGGATACCTTCGAGTCGAACTGTTCAACTAGGCCGAGTTCAACCTCAAGCCCCTGGTCATCGCACCGTTTTCTGTAACGATCGCGATGCCAATCTTCACGTCCGATTCAAGGGGAATTCGATATCGACCACAAAATACAATCTTTTCACTTTTTTGCCAAAAGCTCTGTTTGAACAGTTTAGGCGGGTGGCTAATCTGTACTTTCTTACAATCTCAATTTTGTCAGCTACACCTATCAGTCCTGTGTCTCCCATAACTAATGTGGCTCCTTTATCATTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAGAATGACTTGGCCGTGAACAATAATTTGATAGAAGTTCTGCAAGACCAAAAGTGGGTTTCCATCCCTTGGAAAAGGGTTCAAGTTGGAGATGTTGTCAGGGTTAAGCAGGATGGGTTCTTTCCTGCAGATCTTCTTTTTCTGGCCAGTACCAACCCTGATGGTGTCTGCTATGTTGAGACTTCCAATTTGGATGGGGAAACCAATTTGAAGATTAGGAAAGCGTTGGAAAAGACTTGGGATTACCTGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAGTTCAGTGTGAACAACCAAACAATTCATTGTATACCTTCACTGGAAACCTTATAATTCAAAAGCAAACACTGCCTCTCAGTCCTAACCAACTTTTGTTGCGAGGGTGCAGCCTTAGGAATACAGAGTATGTTGTTGGGGTTGTTATTTTTACTGGACATGAGACAAAGGTTATGATGAATACAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTGGACAAACTCATACTTGCTCTGTTTGCGACTCTCTTTGTAATGTGTTTACTTGGAGCCACTGGCAGCGGCATCTTTGTAAACAACAAGTATTTCTACTTGCGTCCTAATGCAGGTGATGAGGGTTCTGGGCAGTTCAACCCAGGGAATAGACCTTTGGTTATTATTTTGACCATGTTTACCCTCATCACGCTATACTCAACAATCATCCCAATTTCACTTTATGTATCAATAGAGATGATCAAATTTGTTCAGTGCACTCAGTTTATCAACAAAGATTTGCGCATGTATCACAGTGAAACCAATACTCCTGCATTGGCCAGAACTTCCAATCTAAATGAAGAACTTGGGCAGGTGGAATATATCTTCTCTGACAAAACTGGGACCCTAACAAGAAACTTAATGGAGTTCTTCAAATGTTCAATTGGAGGGGAGATTTATGGAAATGGCATCACTGAAATTGAGAGAGGATTGGCTGAACGCAATGACATTAAAATTCAGGAAAATCGATCAGCTAATGTAGTGCAAGAAAAGGGTTTTAATTTTGATGATACAAGGCTTATGCGTGGAGCCTGGAGGAATGAGCCTAATCCTGATAGTTGCAGAGAATTTTTCAGATGCCTTGCTATATGTCATACAGTACTTCCTGAGGGTGATGAGTCCCCTGAAAAGATCAGATATCAAGCTGCATCACCTGATGAGGCTGCTTTGGTCGTTGCTGCAAAGAACTTTGGTTTTTTCTTTTACAGGCGCACACCTACCTCGGTATATGTTCGTGAATCTCATGTTGAGAAGATGGGTAAAATTCAGGATGTGTCGTATGAGATCTTGAATGTGCTAGAGTTTAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCAGATGGGAGACTTGTGTTGTACTGTAAGGGTGCCGATAGTGTAATTTATGAGAGATTGGCCAATGGTTATAATGATATAAAGAAAGTGACTAGGGAACATTTGGAACAATTTGGATCTTCTGGACTGCGAACTTTATGCCTAGCATACAAAGAATTGCCTCCTGATGTGTACGAAAGCTGGAATGAGAAGTTTATCCAAGCCAAGTCATCTCTCCGTGATCGTGAAAAGAAGTTAGATGAGGTGGCGGAACTTATAGAAAATGGGCTTGTTTTGATTGGTTGCACTGCCATAGAAGACAAGCTTCAAGAAGGAGTACCAAATACTATAGAGACTCTTCAAAGGGCTGGCATTAAAATTTGGGTTCTTACTGGAGATAAGATTGAGACCGCCATAAATATTGCCTATGCATGCAATCTAATAAACAATGAAATGAAGCAATTTGTTATCAGTTCTGAAACTGATGTAATTAGAGAAGTTGAGGAAAGGGGTGACCAAGTGGAAATTGCACGTGTTACTAAGGAAGAAGTTAGAAAGGAGCTGAAGAAGTGCCTTGAGGAAGCACAGAGCTACCTTTCGTCTCTATCTGGTCCTAAATTAGCGCTTGTAATTGATGGAAAATGTCTAATGTATGCCTTAGATCCTAGTTTAAGAGTGATGCTGCTGAATTTGAGTTTAAATTGTCATGGTGTTGTTTGCTGCCGAGTTTCTCCTTTACAAAAAGCACAGGTCACAAGTTTGGTTAAAAAGGGAGCACGGAAAATAACACTTAGTATTGGTGATGGAGCTAATGATGTCAGCATGATTCAGGCTGCTCATGTTGGTGTTGGCATTAGTGGGCTGGAGGGGATGCAAGCAGTAATGGCTAGTGATTTTGCCATTGCACAATTTCGTTACCTTGCAGATTTATTACTCGTTCATGGTCGGTGGTCATATCTTAGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAATCTCACATTCACTCTCACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGTCAGAGGTTCTATGATGATTGGTTTCAGTCATTATATAATGTGATCTTCACAGCACTACCAGTGATCATTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTTTCCCTGAAGTACCCTGAGCTGTACATGGAGGGGATAAAAAATGTCTTCTTCAAATGGAGAGTCGTGGCTATATGGGCCTTTTTTTCTGTTTACCAGTCTCTAATATTGTATTATTTTGTCAGTACATCAAGTTTAACTGCTAAAAATTCTGCTGGCCAAACATTTGGAGTGTGGGATGTCAGTACATTGGCGTTCACATGTATTGTAATAACTGTGAACTTGCGGCTTCTTATGAGTTGCAATTCAATTACAAAGTGGCACACTATTAGCGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGCGTTCATATATTGTGCCATCATTGGAAAGGGAAATACTTATTTTGTCATATATGTATTGATGAGTACGATCTATTTCTACCTCACAATTATTTTGGTACCCGTTGTTGCGCTTTTTGGGGACTTCGTTTATCAAGGGGTTCAAAGATGGTTCTTCCCATATGACTATCAGATTGTTCAGGAAATACATCGACACGAAGTGGAGGGTACTAGCAGGGCACGACTGCTGGAGATAGAGAACCAGCTCACCCCAAATGAGGCAAGAAGCTATGCAATATCTCAACTCCCACGCGAGCTCTCAAAGCACACCGGGTTTGCTTTTGATTCGCCCGGGTATGAGTCCTTTTTCGCCGCACAGTTAGGTGTATTTGCCCCACAAAAGGCATGGGATGTTGCCAGGCGAGCTAGTGCCAAGTCAAAGCCCAAGGTCCAGAAAAAATGA 3693 0.4135 MSGWDRVRTSSSSSSRSSLGMNSNPTRNLPNRIPSSRTVQLGRVQPQAPGHRTVFCNDRDANLHVRFKGNSISTTKYNLFTFLPKALFEQFRRVANLYFLTISILSATPISPVSPITNVAPLSLVLLISLIKEAFEDWKRFQNDLAVNNNLIEVLQDQKWVSIPWKRVQVGDVVRVKQDGFFPADLLFLASTNPDGVCYVETSNLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIIQKQTLPLSPNQLLLRGCSLRNTEYVVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILALFATLFVMCLLGATGSGIFVNNKYFYLRPNAGDEGSGQFNPGNRPLVIILTMFTLITLYSTIIPISLYVSIEMIKFVQCTQFINKDLRMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGNGITEIERGLAERNDIKIQENRSANVVQEKGFNFDDTRLMRGAWRNEPNPDSCREFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVVAAKNFGFFFYRRTPTSVYVRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADSVIYERLANGYNDIKKVTREHLEQFGSSGLRTLCLAYKELPPDVYESWNEKFIQAKSSLRDREKKLDEVAELIENGLVLIGCTAIEDKLQEGVPNTIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDVIREVEERGDQVEIARVTKEEVRKELKKCLEEAQSYLSSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHGVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSLKYPELYMEGIKNVFFKWRVVAIWAFFSVYQSLILYYFVSTSSLTAKNSAGQTFGVWDVSTLAFTCIVITVNLRLLMSCNSITKWHTISVGGSILAWFIFAFIYCAIIGKGNTYFVIYVLMSTIYFYLTIILVPVVALFGDFVYQGVQRWFFPYDYQIVQEIHRHEVEGTSRARLLEIENQLTPNEARSYAISQLPRELSKHTGFAFDSPGYESFFAAQLGVFAPQKAWDVARRASAKSKPKVQKK 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0749 1230 SUPERFAMILY Calcium ATPase, transduction domain A 150 293 IPR008250 -
Mibi12g0749 1230 FunFam Phospholipid-transporting ATPase 540 695 - -
Mibi12g0749 1230 Gene3D - 544 690 IPR023299 GO:0000166
Mibi12g0749 1230 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 836 942 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi12g0749 1230 Coils Coil 771 798 - -
Mibi12g0749 1230 FunFam Phospholipid-transporting ATPase IC 429 441 - -
Mibi12g0749 1230 FunFam Phospholipid-transporting ATPase 128 297 - -
Mibi12g0749 1230 MobiDBLite consensus disorder prediction 1 43 - -
Mibi12g0749 1230 Gene3D - 693 903 IPR023214 -
Mibi12g0749 1230 PRINTS P-type cation-transporting ATPase superfamily signature 432 446 - -
Mibi12g0749 1230 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Mibi12g0749 1230 Pfam Phospholipid-translocating P-type ATPase C-terminal 891 1137 IPR032630 -
Mibi12g0749 1230 CDD P-type_ATPase_APLT_Dnf-like 69 1023 - -
Mibi12g0749 1230 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 439 702 IPR023299 GO:0000166
Mibi12g0749 1230 SUPERFAMILY HAD-like 420 905 IPR036412 -
Mibi12g0749 1230 SFLD C1.7: P-type atpase like 414 914 - -
Mibi12g0749 1230 Pfam Cation transport ATPase (P-type) 529 623 - -
Mibi12g0749 1230 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 1137 IPR023298 -
Mibi12g0749 1230 MobiDBLite consensus disorder prediction 1 47 - -
Mibi12g0749 1230 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 67 1145 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Mibi12g0749 1230 FunFam Phospholipid-transporting ATPase 696 903 - -
Mibi12g0749 1230 Gene3D - 132 297 - -
Mibi12g0749 1230 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
Mibi12g0749 1230 Pfam Phospholipid-translocating ATPase N-terminal 54 118 IPR032631 -
Mibi12g0749 1230 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1186 - -
Mibi12g0749 1230 SFLD p-type atpase 414 914 IPR044492 -
Mibi12g0749 1230 Pfam E1-E2 ATPase 153 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0749 Mibi-ChrMibi12 20120611 20138592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0749 18 1230 Primary Pumps ATPases AT1G59820 78.325 0.0 2029