Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0748 ATGATGAACGAGGGTTCGTTTGCGAATGGTGCGGCTAATACTGCGCCGTTTAATCTGGCGGACATCTGGCAGTTTCCGATTAATGTCGGTGCTGCTCTCGGCGATTCTGGCGGTGGCGGATTGGGCCTGAGGAGGCCACAGTTTGGGCATAATTTGGGGCCCTTACCGTTCGGTGATTATACGAATCGGGATGTGTCATGTAATGATCAAATTTGTTCAGAGCAGAGAGGGAATAATAATGATGATGATCATAATAATAGGAAGCGTCGTGAATCAGAGGATGAGTCCACCAAGGGAGTTTCTACCAGTAATGGCGGCAATGGAATGAATGATGGTGGTGAAGGAAAACGGCTTAAAGCTTCAGGGAATAGGAATGAGAGTCAGGAGACTAAAGCTGAAGCAGAGCCCAGTTCAGGAAAGCTTGCGGAGCAAAATAGCCAGCAACCTCCTCCTGAGCCTCCTAAGCAGGATTATATTCATGTTCGAGCAAGGAGAGGTCAAGCTACTGATAGCCACAGTCTAGCTGAAAGAGCCAGAAGGGAGAAGATAAGTGAGAGGATGAAAATTCTTCAGGATTTGGTCCCGGGTTGTAATAAGGTTATTGGGAAAGCGCTGGTCCTTGATGAGATTATAAATTATATCCAATCACTACAGCGTCAAGTTGAGTTCCTGTCTATGAAACTTGAAGCTGTAAATTCAAGAATGAACCCTGGCATCGAAGTCTTTCCTCCTAAAGATTTTGGTCAACAGTCATTTGATACAGCTGGCCTGGCATTTGGCTCGCAAGCTACAAGAGACTATAGCCGGGGTTCGTCGCCGGAGTGGTTACACATGCAGGTAGGTGGTGGTTTTGAAAGAACTTCTTAG 867 0.466 MMNEGSFANGAANTAPFNLADIWQFPINVGAALGDSGGGGLGLRRPQFGHNLGPLPFGDYTNRDVSCNDQICSEQRGNNNDDDHNNRKRRESEDESTKGVSTSNGGNGMNDGGEGKRLKASGNRNESQETKAEAEPSSGKLAEQNSQQPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGIEVFPPKDFGQQSFDTAGLAFGSQATRDYSRGSSPEWLHMQVGGGFERTS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0748 288 MobiDBLite consensus disorder prediction 76 97 - -
Mibi12g0748 288 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 236 IPR036638 GO:0046983
Mibi12g0748 288 MobiDBLite consensus disorder prediction 71 157 - -
Mibi12g0748 288 Gene3D - 164 238 IPR036638 GO:0046983
Mibi12g0748 288 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 74 258 IPR024097 GO:0006355
Mibi12g0748 288 MobiDBLite consensus disorder prediction 117 133 - -
Mibi12g0748 288 Pfam Helix-loop-helix DNA-binding domain 171 218 IPR011598 GO:0046983
Mibi12g0748 288 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 167 217 IPR011598 GO:0046983
Mibi12g0748 288 CDD bHLH_AtBPE_like 157 242 - -
Mibi12g0748 288 FunFam Basic helix-loop-helix transcription factor 164 236 - -
Mibi12g0748 288 SMART finulus 173 223 IPR011598 GO:0046983
Mibi12g0748 288 Coils Coil 214 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0748 Mibi-ChrMibi12 20074636 20077118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0748 1 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 58.065 4.44e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g0748 HLH 2.4e-08 No_clan