Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0736 ATGACAAATGTAGCTAGAAGAGTGAGTTACCATCTTCATTCTCAACTTGTATCTGCTTCTCCGGCCGCCTCCTCCTCCGCCGTTTTCAATTCCAAACCACCGTCTCAGGCGTTGCCGTTAGCCGCCTCTGCCGCCGATATCATTAACCACGAGCTAAAGCTTCTACTAGGAGTTTGCCTAAGTTTTTTGGAAGCATCGAAAATGTCACGGAAAGGTTTGATGGAACAAGATCTGAGTAAACTGGATGTAGCAAAATTGCATCCACTTTCTCCTGAAGTCATATCTCGGCAGGCTACCATTAATATTGGCACTATAGGCCATGTGGCTCATGGCAAATCAACAGTTGTCAAGGCCATATCAGGTGTTCAGACTGTTCGATTTAAAAATGAGTTGGAGCGTAACATTACAATCAAGCTTGGATATGCGAATGCAAAGATATACAAGTGTGAAGATGAGCGGTGTCCTAGGCCCATGAGCTACAAGGCATATGGAAGTGGAAAAGAAGACAATCCTATGTGTGATGTGCCGGGATATGAAAACTGCAGGATGAAATTGTTGAGACATGTGTCTTTTGTGGATTGCCCGGGCCATGATATTCTTATGGCTACTATGCTTAATGGAGCAGCAATCATGGATGGAGCTTTATTGCTTATTGCTGCAAATGAGAGTTGTCCGCAACCACAAACCTCTGAGCATCTGGCTGCTGTGGAAATTATGCGTTTACAACACATAATAATTCTTCAGAATAAGGTTGATCTGATTCAAGAAAATGTGGCTATCAATCAGCATGAAGCGATTCAGAAGTTCATACAAGGAACTGTTGCTGACAAGGCACCTGTAGTCCCGATTTCAGCCCAGCTAAAATATAATATAGATGTTGTTTGTGAGTACATTGTGAAAAAAATCCCAATCCCTGAAAGGAACTTTGTCTCACCACCTAATATGATTGTAATCCGATCTTTTGATGTCAATAAGCCTGGGTTTGAAGTTGATGAAATTAAAGGAGGTGTAGCTGGTGGAAGCATTCTCAGGGGTGTTTTGAAGGTAAACCAATTCATTGAAGTTCGCCCTGGAATAGTTGTCAAGGATGAGAGCGGGAATATAAGATGCACCCCCATATATTCTAGAATAGTTTCATTATATGCTGAACAAAACGAGCTTCAATTTGCTGTGCCTGGAGGTCTAATTGGTGTGGGCACAACCATGGATCCCACATTGACGCGTGCTGACAGATTGGTGGGGCAAGTTCTTGGAGAGGTTGGATCACTGCCTGAGGTTTATGTTGAACTTGAGGTGAACTTCTTTTTGCTTCGAAGGCTTCTTGGTGTCCGGACAAAAGGATCTGAGAGGCAAGGAAAGGTATCCAAGCTTGCCAAAGCAGAGATCCTAATGTTGAACATAGGATCAATGTCAACCGGAGCCAGAGTTCTTGCAGTGAAGAATGATTTGGCAAAGTTGCAACTGACTTCCCCAGTGTGCACCAGTAAGGGGGAGAAGATTGCTCTGAGTCGGCGTGTTGAGAAGCATTGGCGTCTGATTGGATGGGGCCAAATCCAAGCAGGAACCACCATTGATATACCAGCTGCTCATGTTTTGAATTAA 1602 0.4376 MTNVARRVSYHLHSQLVSASPAASSSAVFNSKPPSQALPLAASAADIINHELKLLLGVCLSFLEASKMSRKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDNPMCDVPGYENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADKAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFVSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVYVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKAEILMLNIGSMSTGARVLAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGTTIDIPAAHVLN 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0736 533 PRINTS GTP-binding elongation factor signature 190 200 IPR000795 GO:0003924|GO:0005525
Mibi12g0736 533 PRINTS GTP-binding elongation factor signature 244 253 IPR000795 GO:0003924|GO:0005525
Mibi12g0736 533 PRINTS GTP-binding elongation factor signature 206 217 IPR000795 GO:0003924|GO:0005525
Mibi12g0736 533 PRINTS GTP-binding elongation factor signature 101 114 IPR000795 GO:0003924|GO:0005525
Mibi12g0736 533 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 68 526 - -
Mibi12g0736 533 Gene3D - 97 307 IPR027417 -
Mibi12g0736 533 FunFam Eukaryotic translation initiation factor 2 subunit gamma 308 423 - -
Mibi12g0736 533 CDD eIF2_gamma_II 308 421 IPR044127 GO:0000049
Mibi12g0736 533 CDD eIF2_gamma 100 307 IPR044128 GO:0005525
Mibi12g0736 533 SUPERFAMILY Translation proteins 307 421 IPR009000 -
Mibi12g0736 533 Gene3D Translation factors 309 423 - -
Mibi12g0736 533 Pfam Elongation factor Tu GTP binding domain 99 303 IPR000795 GO:0003924|GO:0005525
Mibi12g0736 533 Pfam Initiation factor eIF2 gamma, C terminal 429 518 IPR015256 -
Mibi12g0736 533 FunFam Eukaryotic translation initiation factor 2 subunit gamma 97 307 - -
Mibi12g0736 533 Pfam Elongation factor Tu domain 2 335 417 IPR004161 GO:0005525
Mibi12g0736 533 Gene3D Translation factors 424 523 - -
Mibi12g0736 533 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 422 519 IPR009001 -
Mibi12g0736 533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 309 IPR027417 -
Mibi12g0736 533 CDD eIF2_gamma_III 424 518 IPR015256 -
Mibi12g0736 533 FunFam Eukaryotic translation initiation factor 2 subunit gamma 424 523 - -
Mibi12g0736 533 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 97 306 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0736 Mibi-ChrMibi12 19705232 19714233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0736 68 529 Eukaryotic Initiation Factors Gene Family AT1G04170 90.065 0.0 872