Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0726 ATGAAGCGGTTTCCTGGTCAAATAGCGATCCCTCTACTTGTGTTGATCATAACCACCAGCCGATGTGTCTGGGTTGTTATCTCAAACGACTGTGGAGGAAAGGAAATTGCATCTACAATCAATGTTGGCCAATCTGGTCAGTTCAAAACAGTTCAGGCAGCCATTGATTCCATACAAAGCAACAATGCTCGGTGGGTGAAAATTCACATATATCCAGGAAAATACACAGAAAAGGTGCAGATTCCAATAGATAAACCATGTATCTTTTTGGAAGGGGAAGGCAGAAGTGTTACAACAATTACGTTTAATGACCACCAACAAACAGATTCTAGTGCTACCTTCACCTCTTATCCAAACAATGTCGTGGCCACTGGCATCAACTTCGAGAACACATTTGATGCATTAAGAGCGGCAAGCAATGAAAGAGTAAAGGAAATTAGACCAGCTTTGGCAGCGAGAATTTATGGCGACAAATCTGCGTTTTTCGATTGTGGCTTTTTGGGTTTTCAAGACACACTTTGGGATTCTAGTGGCCGTCATTACTTCAAGAAGTGCTATATTCAGGGTGCTGTGGACTTCATTTTTGGCAACGGCCAATCCTATTTCGAGCATTGTTACATGAACGTGACTTTAAGCGCATCAGAAGCCCAAGTTCCATATGGATATGTAACCGCACAAGGGAGAAGTTCAGACAATGAGACAGGTGGCTTTGTATTCAGTGGGGGTCAAGTTGTAGGAAGCGGACCAGTTTTCCTAGGGAGAGCTTATGGCCCTTATTCAAGAGTTATATTTCTTGGAACATTTCTTGATTATGTGGTATCTCCTCAAGGATGGGATGCTTGGAGTTATGCACACCATGAGGAGAATTTGATGTATGCTGAGGTTCAATGTAGAGGTCCGGGGGCAAATCTTAGACAGCGTGTTCCATGGGAAAAGAATCTCTCTGCTTCCCAGCTAAATCAATTTTCAATATCATCGTTCATAAATGAAGATGGATGGATTGCGAATATACCATGA 1017 0.4248 MKRFPGQIAIPLLVLIITTSRCVWVVISNDCGGKEIASTINVGQSGQFKTVQAAIDSIQSNNARWVKIHIYPGKYTEKVQIPIDKPCIFLEGEGRSVTTITFNDHQQTDSSATFTSYPNNVVATGINFENTFDALRAASNERVKEIRPALAARIYGDKSAFFDCGFLGFQDTLWDSSGRHYFKKCYIQGAVDFIFGNGQSYFEHCYMNVTLSASEAQVPYGYVTAQGRSSDNETGGFVFSGGQVVGSGPVFLGRAYGPYSRVIFLGTFLDYVVSPQGWDAWSYAHHEENLMYAEVQCRGPGANLRQRVPWEKNLSASQLNQFSISSFINEDGWIANIP 338
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0726 338 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 335 - -
Mibi12g0726 338 Pfam Pectinesterase 44 330 IPR000070 GO:0030599|GO:0042545
Mibi12g0726 338 Gene3D - 34 337 IPR012334 -
Mibi12g0726 338 ProSitePatterns Pectinesterase signature 2. 187 196 IPR033131 -
Mibi12g0726 338 SUPERFAMILY Pectin lyase-like 39 334 IPR011050 -
Mibi12g0726 338 FunFam Pectinesterase 34 338 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi12g0726 Mibi-ChrMibi12 19359997 19366216 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0726 10 287 Carbohydrate Esterase AT2G19150 44.643 1.21e-74 230